RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CAPSQ13938 189 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 NR1I3Q14994 352 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 KRT31Q15323 416 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 MARCH8Q5T0T0 291 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 CDCA2Q69YH5 1023 aaPredicted RBP16.61■□□□□ 0.25
COL4A5-203ENST00000470339 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 METTL13Q8N6R0 699 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 PCSK9Q8NBP7 692 aaKnown RBP16.61■□□□□ 0.25
COL4A5-203ENST00000470339 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
COL4A5-203ENST00000470339 NFKBIZQ9BYH8 718 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 C2orf40Q9H1Z8 148 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
COL4A5-203ENST00000470339 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
COL4A5-203ENST00000470339 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 K7ERI5 159 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 PGK1P00558 417 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 TPM2P07951 284 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 HOXC8P31273 242 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 IGBP1P78318 339 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 ADAM17P78536 824 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 STRN3Q13033 797 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 DRP2Q13474 957 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 CCSAPQ6IQ19 270 aaPredicted RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 FRMD5Q7Z6J6 570 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 IFNLR1Q8IU57 520 aaPredicted RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 LRRC71Q8N4P6 559 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 MKNK1Q9BUB5 465 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
COL4A5-203ENST00000470339 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
COL4A5-203ENST00000470339 SMIM35A0A1B0GVV1 85 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 MYADML2A6NDP7 307 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 CABYRO75952 493 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 PIGRP01833 764 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
COL4A5-203ENST00000470339 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
COL4A5-203ENST00000470339 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 RNF180Q86T96 592 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 KSR1Q8IVT5 923 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 ZBTB8OSQ8IWT0 167 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 KIFC3Q9BVG8 833 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
COL4A5-203ENST00000470339 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
COL4A5-203ENST00000470339 N4BP3O15049 544 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 MAPK13O15264 365 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
COL4A5-203ENST00000470339 CLCN3P51790 818 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 KCNA10Q16322 511 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 TAS1R3Q7RTX0 852 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 RHPN2Q8IUC4 686 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 C7orf31Q8N865 590 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 RNF149Q8NC42 400 aa16.58■□□□□ 0.24
COL4A5-203ENST00000470339 TSEN34Q9BSV6 310 aaKnown RBP16.58■□□□□ 0.24
COL4A5-203ENST00000470339 C17orf102A2RUQ5 167 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
COL4A5-203ENST00000470339 CLIC2O15247 247 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 SRGAP2CP0DJJ0 459 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 EPB41P11171 864 aaKnown RBP16.57■□□□□ 0.24
COL4A5-203ENST00000470339 GARTP22102 1010 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
COL4A5-203ENST00000470339 PHKA2P46019 1235 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 PTENP60484 403 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 CCDC40Q4G0X9 1142 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 LHX8Q68G74 356 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 ZPBP2Q6X784 338 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 ZNF410Q86VK4 478 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 TRIM59Q8IWR1 403 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 NME8Q8N427 588 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 CCDC113Q9H0I3 377 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 VPS16Q9H269 839 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 IMPACTQ9P2X3 320 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 STYXL1Q9Y6J8 313 aa16.57■□□□□ 0.24
COL4A5-203ENST00000470339 MOXD2PA6NHM9 499 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 RPLP2P05387 115 aaKnown RBP16.56■□□□□ 0.24
COL4A5-203ENST00000470339 ASGR1P07306 291 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 MCCD1P59942 119 aaPredicted RBP16.56■□□□□ 0.24
COL4A5-203ENST00000470339 MAPK6Q16659 721 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 FAM187BQ17R55 369 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 SLFN12LQ6IEE8 588 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 CXCL17Q6UXB2 119 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 CREBRFQ8IUR6 639 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms