RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 BORCS6Q96GS4 357 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 CCDC42Q96M95 316 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 GPR20Q99678 358 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 TSGA10Q9BZW7 698 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 GANQ9H2C0 597 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 HAUS4Q9H6D7 363 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 XPNPEP1Q9NQW7 623 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 CASP8AP2Q9UKL3 1982 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 PCNTO95613 3336 aa10.2□□□□□ -0.78
SMC1A-205ENST00000469129 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 COL1A2P08123 1366 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SLC15A5A6NIM6 579 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 HNRNPDLO14979 420 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 NKRFO15226 690 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 KRT86O43790 486 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SERPING1P05155 500 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 POLR2FP61218 127 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 MKRN3Q13064 507 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 GRM1Q13255 1194 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 LAMC2Q13753 1193 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 RAPGEF1Q13905 1077 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 GRB14Q14449 540 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 ASIC2Q16515 512 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 LY6KQ17RY6 165 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 BRDTQ58F21 947 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 CYP4F22Q6NT55 531 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 CCDC62Q6P9F0 684 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 TRMT1LQ7Z2T5 733 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 GPR142Q7Z601 462 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 PLEKHH3Q7Z736 793 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 RASAL3Q86YV0 1011 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 ACRBPQ8NEB7 543 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 ATP8B4Q8TF62 1192 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 BSNDQ8WZ55 320 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 BICD1Q96G01 975 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 CAPNS2Q96L46 248 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SPATA33Q96N06 139 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SPAG5Q96R06 1193 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SH2D3AQ9BRG2 576 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 SMARCAD1Q9H4L7 1026 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 BCAS3Q9H6U6 928 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 NHEJ1Q9H9Q4 299 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 KIAA1586Q9HCI6 787 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 ARHGAP28Q9P2N2 729 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 DNAI1Q9UI46 699 aa10.19□□□□□ -0.78
SMC1A-205ENST00000469129 BZW2Q9Y6E2 419 aaKnown RBP10.19□□□□□ -0.78
SMC1A-205ENST00000469129 THSD7BQ9C0I4 1608 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 ATP8B3O60423 1300 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 ADGRA2Q96PE1 1338 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 DYNC1I1O14576 645 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 EPHB6O15197 1021 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 PMM2O15305 246 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 AKR1B10O60218 316 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 MAFO75444 373 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 ARIH2O95376 493 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 LCA5LO95447 670 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 ATP4AP20648 1035 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CASQ1P31415 396 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 ARL2P36404 184 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 LIG4P49917 911 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 KIF11P52732 1056 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 VAV2P52735 878 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 GNG11P61952 73 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 TUBB2AQ13885 445 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 TARBP2Q15633 366 aaKnown RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 KLHDC7AQ5VTJ3 777 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 TRIM65Q6PJ69 517 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 MAMDC4Q6UXC1 1216 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 DPP9Q86TI2 863 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 VPS36Q86VN1 386 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CCDC155Q8N6L0 562 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 PCYT2Q99447 389 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CHP1Q99653 195 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CRACR2AQ9BSW2 395 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 TUBB2BQ9BVA1 445 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 NLRC4Q9NPP4 1024 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 LZTFL1Q9NQ48 299 aa10.18□□□□□ -0.78
SMC1A-205ENST00000469129 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.18□□□□□ -0.78
SMC1A-205ENST00000469129 LRRIQ4A6NIV6 560 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 HBP1O60381 514 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 NOL4O94818 638 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
SMC1A-205ENST00000469129 PIGRP01833 764 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 HSPA1AP0DMV8 641 aaKnown RBP10.17□□□□□ -0.78
SMC1A-205ENST00000469129 HSPA1BP0DMV9 641 aaKnown RBP10.17□□□□□ -0.78
SMC1A-205ENST00000469129 UCHL3P15374 230 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 FERP16591 822 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 PON1P27169 355 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 CNGA1P29973 690 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 GTF2H1P32780 548 aa10.17□□□□□ -0.78
SMC1A-205ENST00000469129 MXI1P50539 228 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms