RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 ZBTB8OSQ8IWT0 167 aa19.2■□□□□ 0.66
CLDN11-202ENST00000468358 CALML4Q96GE6 196 aa19.2■□□□□ 0.66
CLDN11-202ENST00000468358 POLD4Q9HCU8 107 aa19.2■□□□□ 0.66
CLDN11-202ENST00000468358 CSPG5O95196 566 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 EOMESO95936 686 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 LIG1P18858 919 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 MARCKSP29966 332 aaPredicted RBP19.19■□□□□ 0.66
CLDN11-202ENST00000468358 LONP1P36776 959 aaKnown RBP19.19■□□□□ 0.66
CLDN11-202ENST00000468358 RAB27AP51159 221 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 POU5F1BQ06416 359 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 PPP2R5AQ15172 486 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 TMEM132AQ24JP5 1023 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 KCNK18Q7Z418 384 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 HELQQ8TDG4 1101 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
CLDN11-202ENST00000468358 IFT74Q96LB3 600 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 C11orf84Q9BUA3 381 aaPredicted RBP19.19■□□□□ 0.66
CLDN11-202ENST00000468358 TMEM117Q9H0C3 514 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 FAM105AQ9NUU6 356 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 COL6A3P12111 3177 aa19.19■□□□□ 0.66
CLDN11-202ENST00000468358 H3BNC9 293 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 TSPAN1O60635 241 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 RB1P06400 928 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 GRIN1Q05586 938 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 MBTD1Q05BQ5 628 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 PCBP1Q15365 356 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLDN11-202ENST00000468358 PTPROQ16827 1216 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 IFNLR1Q8IU57 520 aaPredicted RBP19.18■□□□□ 0.66
CLDN11-202ENST00000468358 DEPTORQ8TB45 409 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 KIFAP3Q92845 792 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 LPPQ93052 612 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 CPB2Q96IY4 423 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 PNMA5Q96PV4 448 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 AAASQ9NRG9 546 aa19.18■□□□□ 0.66
CLDN11-202ENST00000468358 TRANK1O15050 2925 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 ATF7P17544 494 aaPredicted RBP19.17■□□□□ 0.66
CLDN11-202ENST00000468358 POU3F3P20264 500 aaPredicted RBP19.17■□□□□ 0.66
CLDN11-202ENST00000468358 AXLP30530 894 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 NAMPTP43490 491 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 HYIQ5T013 277 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 NOTUMQ6P988 496 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 LRRC43Q8N309 656 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 BSNDQ8WZ55 320 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 PGBD4Q96DM1 585 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 USP28Q96RU2 1077 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 RUSC1Q9BVN2 902 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 PLVAPQ9BX97 442 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 NFKBIZQ9BYH8 718 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 C2orf40Q9H1Z8 148 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 TYW1Q9NV66 732 aaKnown RBP19.17■□□□□ 0.66
CLDN11-202ENST00000468358 LMCD1Q9NZU5 365 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 HCSTQ9UBK5 93 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 INPP5FQ9Y2H2 1132 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 PCDHB2Q9Y5E7 798 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
CLDN11-202ENST00000468358 C5orf67F2Z3F1 127 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 LINC00271P0C7V0 271 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 PDIA4P13667 645 aaKnown RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 HOXA11P31270 313 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 DHX8Q14562 1220 aaKnown RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 STK38Q15208 465 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 PTPAQ15257 358 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 FOXD4L6Q3SYB3 417 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 CLLU1OSQ5K130 101 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 GLB1LQ6UWU2 654 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 FOXD4L3Q6VB84 417 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 ZNF598Q86UK7 904 aaKnown RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 KCTD17Q8N5Z5 321 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 ZNF396Q96N95 335 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 CASD1Q96PB1 797 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 TRAIPQ9BWF2 469 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 TRIM6Q9C030 488 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 RNF19AQ9NV58 838 aa19.16■□□□□ 0.66
CLDN11-202ENST00000468358 PRMT7Q9NVM4 692 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-202ENST00000468358 MYH11P35749 1972 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 CCDC169A6NNP5 214 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 B4GALT5O43286 388 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 HIP1RO75146 1068 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 PLA2G4BP0C869 781 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 ZSCAN22P10073 491 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 ARF4P18085 180 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 KARSQ15046 597 aaKnown RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 TMEM119Q4V9L6 283 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 SPECC1Q5M775 1068 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 CDR2LQ86X02 465 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 THNSL1Q8IYQ7 743 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 MRPL38Q96DV4 380 aaKnown RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 CCDC51Q96ER9 411 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 DRC1Q96MC2 740 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 KIFC3Q9BVG8 833 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 MRPL9Q9BYD2 267 aaKnown RBP19.15■□□□□ 0.66
CLDN11-202ENST00000468358 PRDM6Q9NQX0 595 aa19.15■□□□□ 0.66
CLDN11-202ENST00000468358 GRM6O15303 877 aa19.14■□□□□ 0.65
CLDN11-202ENST00000468358 SLC26A4O43511 780 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms