RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NOP56O00567 594 aaKnown RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 CALUO43852 315 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 KIF20AO95235 890 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 C22orf31O95567 290 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 RFC5P40937 340 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 RGS2P41220 211 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 MAN2A1Q16706 1144 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 FAM114A1Q8IWE2 563 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 PLEKHO2Q8TD55 490 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 KAT2BQ92831 832 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC97Q96F63 343 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 CBWD1Q9BRT8 395 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 NOC4LQ9BVI4 516 aaKnown RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 NRBP2Q9NSY0 501 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 GOLGA6L6A8MZA4 724 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 TNPO2O14787 897 aaKnown RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 PSMC4P43686 418 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 SLC26A2P50443 739 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 POLGP54098 1239 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-208ENST00000468300 TNFAIP2Q03169 654 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 CAPSQ13938 189 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 C1orf220Q5T0J3 134 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 FRMD5Q7Z6J6 570 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 GLG1Q92896 1179 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC113Q9H0I3 377 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 GBP3Q9H0R5 595 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 USP20Q9Y2K6 914 aa9.06□□□□□ -0.96
BRCA1-208ENST00000468300 SLC16A3O15427 465 aaKnown RBP9.05□□□□□ -0.96
BRCA1-208ENST00000468300 PPFIA4O75335 1185 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 NOL4O94818 638 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 TPM3P06753 285 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 GJB1P08034 283 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 CASP14P31944 242 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 DNM2P50570 870 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 GSDMDP57764 484 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 TRIM32Q13049 653 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 DMP1Q13316 513 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-208ENST00000468300 ALCAMQ13740 583 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 RETREG2Q8NC44 543 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 FAM167AQ96KS9 214 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 AZI2Q9H6S1 392 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 KMT5AQ9NQR1 393 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 MAGEC2Q9UBF1 373 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-208ENST00000468300 DENND3A2RUS2 1198 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 ALDH1A1P00352 501 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 CYBAP13498 195 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 MTIF2P46199 727 aaKnown RBP9.05□□□□□ -0.96
BRCA1-208ENST00000468300 VEGFBP49765 207 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 APBA1Q02410 837 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 PRKCZQ05513 592 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-208ENST00000468300 ZBTB9Q96C00 473 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 ACCSQ96QU6 501 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.05□□□□□ -0.964e-6■■■■■ 85.3
BRCA1-208ENST00000468300 RNF186Q9NXI6 227 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 SLC5A4Q9NY91 659 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 ERAP1Q9NZ08 941 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
BRCA1-208ENST00000468300 TTC26A0AVF1 554 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CETN3O15182 167 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 MFAP3LO75121 409 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FGFR1OPO95684 399 aaKnown RBP9.04□□□□□ -0.96
BRCA1-208ENST00000468300 GNA14O95837 355 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 NAMPTP43490 491 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 SYCP1Q15431 976 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FILIP1LQ4L180 1135 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 LRRC71Q8N4P6 559 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 OR6J1Q8NGC5 347 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 PRPF31Q8WWY3 499 aaKnown RBP9.04□□□□□ -0.96
BRCA1-208ENST00000468300 HVCN1Q96D96 273 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 STYXL1Q9Y6J8 313 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FRMPD3Q5JV73 1810 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC169A6NNP5 214 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 HBP1O60381 514 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 IQCF3P0C7M6 154 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 INSRRP14616 1297 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 DLG4P78352 724 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC150Q8NCX0 1101 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CCDC43Q96MW1 224 aaKnown RBP9.04□□□□□ -0.96
BRCA1-208ENST00000468300 TSPAN18Q96SJ8 248 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 MYADML2A6NDP7 307 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 ABLIM1O14639 778 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 PIGRP01833 764 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 CNGA1P29973 690 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FLT3LGP49771 235 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FCGRTP55899 365 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 ADAM17P78536 824 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 WDR59Q6PJI9 974 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 TLK2Q86UE8 772 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
BRCA1-208ENST00000468300 PCIF1Q9H4Z3 704 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms