RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ARL2P36404 184 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 PTENP60484 403 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 CUL4AQ13619 759 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 NBR1Q14596 966 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 KLHL23Q8NBE8 558 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 FAM105AQ9NUU6 356 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 DAXXQ9UER7 740 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 PUF60Q9UHX1 559 aaKnown RBP16.22■□□□□ 0.19
COMMD3-206ENST00000468179 COL6A3P12111 3177 aa16.22■□□□□ 0.19
COMMD3-206ENST00000468179 ITGB1P05556 798 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 PPM1AP35813 382 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 PDE12Q6L8Q7 609 aaKnown RBP16.21■□□□□ 0.19
COMMD3-206ENST00000468179 GLB1LQ6UWU2 654 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 IFNLR1Q8IU57 520 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-206ENST00000468179 THNSL1Q8IYQ7 743 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 KCTD17Q8N5Z5 321 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 COLGALT1Q8NBJ5 622 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 CCDC51Q96ER9 411 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 POLR3FQ9H1D9 316 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-206ENST00000468179 UBN1Q9NPG3 1134 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 LOXHD1Q8IVV2 1947 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 CHD9Q3L8U1 2897 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 COL4A4P53420 1690 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-206ENST00000468179 RALGAPA2Q2PPJ7 1873 aa16.21■□□□□ 0.19
COMMD3-206ENST00000468179 PRRC2BQ5JSZ5 2229 aaKnown RBP16.21■□□□□ 0.18
COMMD3-206ENST00000468179 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
COMMD3-206ENST00000468179 INO80B-WBP1J3KQ70 363 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 BMP15O95972 392 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 CYP11B2P19099 503 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 KRT17Q04695 432 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 PUS10Q3MIT2 529 aaKnown RBP16.2■□□□□ 0.18
COMMD3-206ENST00000468179 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 ARL6IP4Q66PJ3 421 aaKnown RBP16.2■□□□□ 0.18
COMMD3-206ENST00000468179 NOTUMQ6P988 496 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 PADI6Q6TGC4 694 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 ZBTB8OSQ8IWT0 167 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 HACE1Q8IYU2 909 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 POF1BQ8WVV4 589 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 ZNF558Q96NG5 402 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 CWH43Q9H720 699 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 UBE2ZQ9H832 354 aaPredicted RBP16.2■□□□□ 0.18
COMMD3-206ENST00000468179 KIAA1024Q9UPX6 916 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 DNM3Q9UQ16 869 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 LZTS1Q9Y250 596 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
COMMD3-206ENST00000468179 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 FGF18O76093 207 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 GLRA2P23416 452 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 ATP2C1P98194 919 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 PLCB3Q01970 1234 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 TFF2Q03403 129 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 CAPSQ13938 189 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 PPP2R5AQ15172 486 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 URGCPQ8TCY9 931 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 HELQQ8TDG4 1101 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 ASAP3Q8TDY4 903 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 MICAL1Q8TDZ2 1067 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 PABPC5Q96DU9 382 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 CDH23Q9H251 3354 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 MINDY3Q9H8M7 445 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 RNF19AQ9NV58 838 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 SPG21Q9NZD8 308 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 KANSL3Q9P2N6 904 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 A0A087WWV3 80 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 LRRIQ4A6NIV6 560 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 BMP1P13497 986 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 ATF7P17544 494 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 NOMO2Q5JPE7 1267 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 CLLU1OSQ5K130 101 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 KCNT2Q6UVM3 1135 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 MRPL10Q7Z7H8 261 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 ADAMTS19Q8TE59 1207 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 KIFAP3Q92845 792 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 IFT74Q96LB3 600 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 BHMT2Q9H2M3 363 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 TLR9Q9NR96 1032 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
COMMD3-206ENST00000468179 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
COMMD3-206ENST00000468179 TSPAN1O60635 241 aa16.18■□□□□ 0.18
COMMD3-206ENST00000468179 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms