RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CYP26B1Q9NR63 512 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 TSHZ2Q9NRE2 1034 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 FAM105AQ9NUU6 356 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 CDH22Q9UJ99 828 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 INPP5FQ9Y2H2 1132 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 NR2E1Q9Y466 385 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 KMT2EQ8IZD2 1858 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.34■□□□□ 0.69
TRIM56-203ENST00000467847 CARNS1A5YM72 827 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 EML1O00423 815 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 CDKL5O76039 1030 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 QARSP47897 775 aaKnown RBP19.34■□□□□ 0.69
TRIM56-203ENST00000467847 RAB27AP51159 221 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 RNASELQ05823 741 aaKnown RBP19.34■□□□□ 0.69
TRIM56-203ENST00000467847 ITIH3Q06033 890 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 NOMO2Q5JPE7 1267 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 TMEM173Q86WV6 379 aaPredicted RBP19.34■□□□□ 0.69
TRIM56-203ENST00000467847 VPS52Q8N1B4 723 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 TMEM87AQ8NBN3 555 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 SLC7A3Q8WY07 619 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 FAM20AQ96MK3 541 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 PHF20Q9BVI0 1012 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 ADAM7Q9H2U9 754 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 TBC1D13Q9NVG8 400 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 VAV3Q9UKW4 847 aa19.34■□□□□ 0.69
TRIM56-203ENST00000467847 MYO10Q9HD67 2058 aa19.33■□□□□ 0.69
TRIM56-203ENST00000467847 MEIS3P2A8K0S8 358 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 DKC1O60832 514 aaKnown RBP eCLIP19.33■□□□□ 0.68
TRIM56-203ENST00000467847 NPEPPSP55786 919 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 FOXK2Q01167 660 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 PPP4R3AQ6IN85 833 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 NEK8Q86SG6 692 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 CEP170P1Q96L14 293 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 NECTIN4Q96NY8 510 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 ZBP1Q9H171 429 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 IRF2BPLQ9H1B7 796 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 IFT122Q9HBG6 1241 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 COL4A3BPQ9Y5P4 624 aa19.33■□□□□ 0.68
TRIM56-203ENST00000467847 CCNT1O60563 726 aaKnown RBP19.32■□□□□ 0.68
TRIM56-203ENST00000467847 ZNF623O75123 536 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 GCFC2P16383 781 aaKnown RBP19.32■□□□□ 0.68
TRIM56-203ENST00000467847 XBP1P17861 261 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
TRIM56-203ENST00000467847 SCRN1Q12765 414 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 TCF15Q12870 199 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 DDX53Q86TM3 631 aaKnown RBP19.32■□□□□ 0.68
TRIM56-203ENST00000467847 EXOC8Q8IYI6 725 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 AUTS2Q8WXX7 1259 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 ATOH1Q92858 354 aaPredicted RBP19.32■□□□□ 0.68
TRIM56-203ENST00000467847 PGBD4Q96DM1 585 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 ASIC4Q96FT7 647 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 IGSF21Q96ID5 467 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 POMKQ9H5K3 350 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 NRDE2Q9H7Z3 1164 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 AGPAT5Q9NUQ2 364 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 PCDHB2Q9Y5E7 798 aa19.32■□□□□ 0.68
TRIM56-203ENST00000467847 USP34Q70CQ2 3546 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 MARCH6O60337 910 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 OFD1O75665 1012 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 P4HBP07237 508 aaKnown RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 GALTP07902 379 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 SRGAP2CP0DJJ0 459 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 RFC5P40937 340 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 GIT2Q14161 759 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 RARS2Q5T160 578 aaKnown RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 PIK3AP1Q6ZUJ8 805 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 ZNF579Q8NAF0 562 aaKnown RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 URGCPQ8TCY9 931 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 BCL7CQ8WUZ0 217 aaPredicted RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 PRPF31Q8WWY3 499 aaKnown RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 PSPC1Q8WXF1 523 aaKnown RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 RIPOR3Q96MK2 946 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 DZANK1Q9NVP4 752 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 WRAP73Q9P2S5 460 aaPredicted RBP19.31■□□□□ 0.68
TRIM56-203ENST00000467847 DNAJB4Q9UDY4 337 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 PPME1Q9Y570 386 aa19.31■□□□□ 0.68
TRIM56-203ENST00000467847 STK36Q9NRP7 1315 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 WEE2P0C1S8 567 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 CTSAP10619 480 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 MTHFRP42898 656 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 HAS1Q92839 578 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 NAP1L4Q99733 375 aaKnown RBP19.3■□□□□ 0.68
TRIM56-203ENST00000467847 LXNQ9BS40 222 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 DHX33Q9H6R0 707 aaKnown RBP19.3■□□□□ 0.68
TRIM56-203ENST00000467847 BMP2KQ9NSY1 1161 aaPredicted RBP19.3■□□□□ 0.68
TRIM56-203ENST00000467847 GJB4Q9NTQ9 266 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 IRAK3Q9Y616 596 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 CFAP54Q96N23 3096 aa19.3■□□□□ 0.68
TRIM56-203ENST00000467847 ZFHX2Q9C0A1 2572 aaPredicted RBP19.29■□□□□ 0.68
TRIM56-203ENST00000467847 C2CD4DB7Z1M9 353 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 TBX3O15119 743 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 EPCAMP16422 314 aa19.29■□□□□ 0.68
TRIM56-203ENST00000467847 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
TRIM56-203ENST00000467847 SLC11A1P49279 550 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms