RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 LAG3P18627 525 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 RAB27AP51159 221 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 KCNQ1P51787 676 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 UBE3AQ05086 875 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 RILPL1Q5EBL4 403 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 LARP1BQ659C4 914 aaKnown RBP20.18■□□□□ 0.82
CGREF1-208ENST00000467539 MRPL10Q7Z7H8 261 aaKnown RBP20.18■□□□□ 0.82
CGREF1-208ENST00000467539 IGSF22Q8N9C0 903 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 COLGALT1Q8NBJ5 622 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 FAM105AQ9NUU6 356 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 MYO7AQ13402 2215 aa20.18■□□□□ 0.82
CGREF1-208ENST00000467539 FGF18O76093 207 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 GLRA2P23416 452 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 AXLP30530 894 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 PRPHP41219 470 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 CUL4AQ13619 759 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 LEXMQ3ZCV2 418 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 HELQQ8TDG4 1101 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 ASAP3Q8TDY4 903 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 ADAMTS19Q8TE59 1207 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 PABPC5Q96DU9 382 aaKnown RBP20.17■□□□□ 0.82
CGREF1-208ENST00000467539 NFKBIZQ9BYH8 718 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 RAB34Q9BZG1 259 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 HCSTQ9UBK5 93 aa20.17■□□□□ 0.82
CGREF1-208ENST00000467539 FNDC1Q4ZHG4 1894 aaPredicted RBP20.17■□□□□ 0.82
CGREF1-208ENST00000467539 CCT6AP40227 531 aaKnown RBP20.16■□□□□ 0.82
CGREF1-208ENST00000467539 PLCB3Q01970 1234 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 NCBP1Q09161 790 aaKnown RBP20.16■□□□□ 0.82
CGREF1-208ENST00000467539 ECM1Q16610 540 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 CTC1Q2NKJ3 1217 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 HAUS3Q68CZ6 603 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 POTEGQ6S5H5 508 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 KCNT2Q6UVM3 1135 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 MCPH1Q8NEM0 835 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 PGBD4Q96DM1 585 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 LZTS1Q9Y250 596 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 PCDHB2Q9Y5E7 798 aa20.16■□□□□ 0.82
CGREF1-208ENST00000467539 USO1O60763 962 aaKnown RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 OFD1O75665 1012 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 CYP11B2P19099 503 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 KCNA5P22460 613 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 HYAL1Q12794 435 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 CAPSQ13938 189 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 IL17AQ16552 155 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 UBXN11Q5T124 520 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 DTHD1Q6ZMT9 781 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 THNSL1Q8IYQ7 743 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 ZNF558Q96NG5 402 aa20.15■□□□□ 0.82
CGREF1-208ENST00000467539 UHRF1Q96T88 793 aaPredicted RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 MRPL9Q9BYD2 267 aaKnown RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 POLR3FQ9H1D9 316 aaPredicted RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
CGREF1-208ENST00000467539 BRWD1Q9NSI6 2320 aa20.14■□□□□ 0.82
CGREF1-208ENST00000467539 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 INO80B-WBP1J3KQ70 363 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 IRS1P35568 1242 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 ADAM15Q13444 863 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 PDE12Q6L8Q7 609 aaKnown RBP20.14■□□□□ 0.81
CGREF1-208ENST00000467539 PADI6Q6TGC4 694 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 MAEAQ7L5Y9 396 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 CNNM3Q8NE01 707 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 LPPQ93052 612 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 PPP2R3CQ969Q6 453 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 SPG21Q9NZD8 308 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 KIAA1024Q9UPX6 916 aa20.14■□□□□ 0.81
CGREF1-208ENST00000467539 TNFRSF10AO00220 468 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 TSPAN1O60635 241 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 ERLIN2O94905 339 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 PPM1AP35813 382 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 LTBRP36941 435 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 ERVFC1P60507 584 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 ATP2C1P98194 919 aaPredicted RBP20.13■□□□□ 0.81
CGREF1-208ENST00000467539 KRT17Q04695 432 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 MBTD1Q05BQ5 628 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 AMHR2Q16671 573 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 PUS10Q3MIT2 529 aaKnown RBP20.13■□□□□ 0.81
CGREF1-208ENST00000467539 LONRF3Q496Y0 759 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 NOMO2Q5JPE7 1267 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 GLB1LQ6UWU2 654 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 AGMOQ6ZNB7 445 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 MICAL1Q8TDZ2 1067 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 MRPS27Q92552 414 aaKnown RBP20.13■□□□□ 0.81
CGREF1-208ENST00000467539 CCDC51Q96ER9 411 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 GPRC5CQ9NQ84 441 aa20.13■□□□□ 0.81
CGREF1-208ENST00000467539 CARNS1A5YM72 827 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 MEIS3P2A8K0S8 358 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 NCLP19338 710 aaKnown RBP20.12■□□□□ 0.81
CGREF1-208ENST00000467539 ALDH7A1P49419 539 aaKnown RBP20.12■□□□□ 0.81
CGREF1-208ENST00000467539 KRT79Q5XKE5 535 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 SNX29Q8TEQ0 813 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 CSRNP2Q9H175 543 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 IGFLR1Q9H665 355 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 TLR9Q9NR96 1032 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 CLDND1Q9NY35 253 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 DNM3Q9UQ16 869 aa20.12■□□□□ 0.81
CGREF1-208ENST00000467539 GRXCR2A6NFK2 248 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms