RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FGF14Q92915 247 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 LPPQ93052 612 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 ZNF668Q96K58 619 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 RPP25Q9BUL9 199 aaKnown RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 KCNH7Q9NS40 1196 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 SEC63Q9UGP8 760 aaKnown RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 MYH9P35579 1960 aaKnown RBP11.65□□□□□ -0.55
HDAC3-203ENST00000467533 MTCL1Q9Y4B5 1905 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 SPEGQ15772 3267 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 C1QTNF9BB2RNN3 333 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 ZBTB42B2RXF5 422 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 CCER2I3L3R5 266 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 C1QTNF9P0C862 333 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 TARSP26639 723 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 KIF5BP33176 963 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 NRLP54845 237 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 PFKPQ01813 784 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 RSPO2Q6UXX9 243 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 TPRG1Q6ZUI0 275 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 CELF5Q8N6W0 485 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 ZNF707Q96C28 371 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
HDAC3-203ENST00000467533 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 SETXQ7Z333 2677 aaKnown RBP11.64□□□□□ -0.55
HDAC3-203ENST00000467533 IGKV6D-21A0A0A0MT36 114 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 TEX28O15482 410 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 FOXD2O60548 495 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 LILRB3O75022 631 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ATG7O95352 703 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 SPATA31D3P0C874 917 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 FSHRP23945 695 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 PHKA2P46019 1235 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 RPS9P46781 194 aaKnown RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ITGB3BPQ13352 177 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 PPP2R5DQ14738 602 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 SPATA31D4Q6ZUB0 917 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 MTSS1LQ765P7 747 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 CYB5R4Q7L1T6 521 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 CLDN23Q96B33 292 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 RPS6KC1Q96S38 1066 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ADAMTS10Q9H324 1103 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 PCDHA6Q9UN73 950 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 SSX2IPQ9Y2D8 614 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 PCDHA8Q9Y5H6 950 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ZFP37Q9Y6Q3 630 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
HDAC3-203ENST00000467533 ERICH2A1L162 156 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 B4GALT3O60512 393 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 SOD2P04179 222 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 DARSP14868 501 aaKnown RBP11.62□□□□□ -0.55
HDAC3-203ENST00000467533 TMOD1P28289 359 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 MTAPQ13126 283 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 SIM2Q14190 667 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-203ENST00000467533 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
HDAC3-203ENST00000467533 ABHD15Q6UXT9 468 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 LRRC71Q8N4P6 559 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 URGCPQ8TCY9 931 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
HDAC3-203ENST00000467533 ZDHHC7Q9NXF8 308 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
HDAC3-203ENST00000467533 ASPMQ8IZT6 3477 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 GREB1Q4ZG55 1949 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 MEIS3P2A8K0S8 358 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 IFIT3O14879 490 aaKnown RBP11.61□□□□□ -0.55
HDAC3-203ENST00000467533 CCNE2O96020 404 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 SKIP12755 728 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 GLUD2P49448 558 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 GPC3P51654 580 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 SWSAP1Q6NVH7 229 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 EFCAB12Q6NXP0 572 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 MIS18BP1Q6P0N0 1132 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 ZNF852Q6ZMS4 543 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 PALB2Q86YC2 1186 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 ZNF280BQ86YH2 543 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 FAM193BQ96PV7 902 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-203ENST00000467533 NELL2Q99435 816 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 PHF20Q9BVI0 1012 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 PRKD2Q9BZL6 878 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 CDH7Q9ULB5 785 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 LHX6Q9UPM6 363 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms