RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 PWP1Q13610 501 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 KCTD2Q14681 263 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 RAB3GAP1Q15042 981 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ZYXQ15942 572 aaKnown RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 ABCB5Q2M3G0 1257 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 CERKLQ49MI3 558 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 RPS26P11Q5JNZ5 115 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 NAA16Q6N069 864 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 MAMDC4Q6UXC1 1216 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 CYFIP1Q7L576 1253 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 FAM178BQ8IXR5 827 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 FBXO15Q8NCQ5 510 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 PHOSPHO2Q8TCD6 241 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 HEXIM2Q96MH2 286 aaKnown RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 SLC9A7Q96T83 725 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 SIL1Q9H173 461 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 UPF3AQ9H1J1 476 aaKnown RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 HIPK3Q9H422 1215 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 GPN3Q9UHW5 284 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-207ENST00000467273 TLR6Q9Y2C9 796 aa6.56□□□□□ -1.36
PTCD3-207ENST00000467273 TRIOO75962 3097 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 MYH1P12882 1939 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 DCXO43602 365 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-207ENST00000467273 UBTFL1P0CB47 393 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-207ENST00000467273 CYP2C18P33260 490 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 EIF4A3P38919 411 aaKnown RBP6.55□□□□□ -1.36
PTCD3-207ENST00000467273 GJA9P57773 515 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 TIMM10P62072 90 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 SHROOM1Q2M3G4 852 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-207ENST00000467273 LEXMQ3ZCV2 418 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 OTOP2Q7RTS6 562 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 TTC6Q86TZ1 520 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 RIOX2Q8IUF8 465 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 SPACA3Q8IXA5 215 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 MAGEB6Q8N7X4 407 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 ISL2Q96A47 359 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 UIMC1Q96RL1 719 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 MMP19Q99542 508 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 SH2D4AQ9H788 454 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 CD320Q9NPF0 282 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 AATFQ9NY61 560 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTCD3-207ENST00000467273 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 ADAMTS5Q9UNA0 930 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 C5orf42Q9H799 3197 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 ZNF318Q5VUA4 2279 aa6.55□□□□□ -1.36
PTCD3-207ENST00000467273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-207ENST00000467273 KIF28PB7ZC32 967 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 PF4P02776 101 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 CA3P07451 260 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 TMEM253P0C7T8 217 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 RLBP1P12271 317 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 ACTN1P12814 892 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 RFC2P35250 354 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 RABGGTBP53611 331 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 TAP1Q03518 808 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 ARID5AQ03989 594 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 PLS1Q14651 629 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 GORABQ5T7V8 394 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 ACER1Q8TDN7 264 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 UBXN4Q92575 508 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 GPRASP2Q96D09 838 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 RHOVQ96L33 236 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 IRF2BPLQ9H1B7 796 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 ABHD16BQ9H3Z7 469 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 PRKAG3Q9UGI9 489 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 FAM50BQ9Y247 325 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
PTCD3-207ENST00000467273 COL4A4P53420 1690 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 WDR46O15213 610 aaKnown RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 FLOT1O75955 427 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 SUPT20HL2P0C7V6 817 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 MYOGP15173 224 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 TFE3P19532 575 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 ATP2B1P20020 1258 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 GARTP22102 1010 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 MCAMP43121 646 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 CAMK2GQ13555 558 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 TMEM132BQ14DG7 1078 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 PCNX4Q63HM2 1172 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 TTBK2Q6IQ55 1244 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 FBXL19Q6PCT2 694 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 ATG14Q6ZNE5 492 aa6.53□□□□□ -1.36
PTCD3-207ENST00000467273 DHX38Q92620 1227 aaKnown RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 ZNF512BQ96KM6 892 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 UPF3BQ9BZI7 483 aaKnown RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 UBE2ZQ9H832 354 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-207ENST00000467273 CARS2Q9HA77 564 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms