RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 TWF2Q6IBS0 349 aaKnown RBP15.16■□□□□ 0.02
CHD3-207ENST00000466233 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 RHPN2Q8IUC4 686 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
CHD3-207ENST00000466233 GJA10Q969M2 543 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 DZANK1Q9NVP4 752 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
CHD3-207ENST00000466233 TMEM221A6NGB7 291 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 M0R296 226 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 EML1O00423 815 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 SLC37A4O43826 429 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 OFD1O75665 1012 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 CSPG5O95196 566 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 LYPLA2O95372 231 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
CHD3-207ENST00000466233 C1RP00736 705 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 CTSAP10619 480 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 AXLP30530 894 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 NOMO2Q5JPE7 1267 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 PPFIBP1Q86W92 1011 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 HAS1Q92839 578 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 ZBP1Q9H171 429 aa15.15■□□□□ 0.02
CHD3-207ENST00000466233 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
CHD3-207ENST00000466233 INPPL1O15357 1258 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 GALTP07902 379 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 YWHABP31946 246 aaKnown RBP15.14■□□□□ 0.01
CHD3-207ENST00000466233 MTHFRP42898 656 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
CHD3-207ENST00000466233 PTPN21Q16825 1174 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CHD3-207ENST00000466233 UBALD2Q8IYN6 164 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 CEP170P1Q96L14 293 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 RIPOR3Q96MK2 946 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 NFKBIZQ9BYH8 718 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 IRF2BPLQ9H1B7 796 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 KCNJ14Q9UNX9 436 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
CHD3-207ENST00000466233 ZNF318Q5VUA4 2279 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 CCNT1O60563 726 aaKnown RBP15.13■□□□□ 0.01
CHD3-207ENST00000466233 CLASP2O75122 1294 aaKnown RBP15.13■□□□□ 0.01
CHD3-207ENST00000466233 CXCL14O95715 111 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHD3-207ENST00000466233 FGFR4P22455 802 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 NHLH1Q02575 133 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 SPIRE1Q08AE8 756 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 STK3Q13188 491 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 SUGP1Q8IWZ8 645 aaKnown RBP15.13■□□□□ 0.01
CHD3-207ENST00000466233 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 FBXL6Q8N531 539 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
CHD3-207ENST00000466233 PBXIP1Q96AQ6 731 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 ZNF668Q96K58 619 aaPredicted RBP15.13■□□□□ 0.01
CHD3-207ENST00000466233 NLRP4Q96MN2 994 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 LXNQ9BS40 222 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 SSX2IPQ9Y2D8 614 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
CHD3-207ENST00000466233 TECTAO75443 2155 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 TMEM150BA6NC51 233 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHD3-207ENST00000466233 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 HOXA11P31270 313 aaPredicted RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 PBX3P40426 434 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 RBM10P98175 930 aaKnown RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 RNASELQ05823 741 aaKnown RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 FERMT3Q86UX7 667 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 GPR65Q8IYL9 337 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 HSD17B14Q9BPX1 270 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
CHD3-207ENST00000466233 ORC3Q9UBD5 711 aaPredicted RBP15.12■□□□□ 0.01
CHD3-207ENST00000466233 TRIOO75962 3097 aa15.11■□□□□ 0.01
CHD3-207ENST00000466233 MARCH6O60337 910 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms