RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 KIZQ2M2Z5 673 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 COBLL1Q53SF7 1204 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 TAS1R3Q7RTX0 852 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 ZNF507Q8TCN5 953 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 P2RX5Q93086 422 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 FDXACB1Q9BRP7 624 aaPredicted RBP18.94■□□□□ 0.62
PTPRU-206ENST00000465525 NTPCRQ9BSD7 190 aaKnown RBP18.94■□□□□ 0.62
PTPRU-206ENST00000465525 TRPV6Q9H1D0 765 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 ARHGAP28Q9P2N2 729 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 PCDHB13Q9Y5F0 798 aa18.94■□□□□ 0.62
PTPRU-206ENST00000465525 EIF3DO15371 548 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTPRU-206ENST00000465525 TFDP1Q14186 410 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 SNX17Q15036 470 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 ANKRD40Q6AI12 368 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 STXBP4Q6ZWJ1 553 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 NLRP7Q8WX94 980 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 DHTKD1Q96HY7 919 aaPredicted RBP18.93■□□□□ 0.62
PTPRU-206ENST00000465525 CDHR5Q9HBB8 845 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 RWDD2AQ9UIY3 292 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 TBX20Q9UMR3 447 aa18.93■□□□□ 0.62
PTPRU-206ENST00000465525 TISP43B9A030 160 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 CCNE1P24864 410 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ERCC5P28715 1186 aaPredicted RBP18.92■□□□□ 0.62
PTPRU-206ENST00000465525 GPC3P51654 580 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 GTF2BQ00403 316 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 KNOP1Q1ED39 458 aaKnown RBP18.92■□□□□ 0.62
PTPRU-206ENST00000465525 BMT2Q1RMZ1 405 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 HSP90AA4PQ58FG1 418 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 TAF2Q6P1X5 1199 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ANKRD33Q7Z3H0 272 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 SERINC5Q86VE9 423 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 SYCP3Q8IZU3 236 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 EEF2KMTQ96G04 330 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 KCTD10Q9H3F6 313 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 NOD1Q9Y239 953 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ASAP2O43150 1006 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 B4GALT4O60513 344 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 EDN1P05305 212 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 GSE1Q14687 1217 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 FAM126BQ8IXS8 530 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 TOX2Q96NM4 488 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ACCSQ96QU6 501 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 BPIFA3Q9BQP9 254 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ADAMTS10Q9H324 1103 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 ST6GALNAC4Q9H4F1 302 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 MINDY3Q9H8M7 445 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 IFT122Q9HBG6 1241 aa18.92■□□□□ 0.62
PTPRU-206ENST00000465525 BECN2A8MW95 431 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 K7ERI5 159 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 TLR3O15455 904 aaKnown RBP18.91■□□□□ 0.62
PTPRU-206ENST00000465525 CTSHP09668 335 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 MYL5Q02045 173 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 PTK7Q13308 1070 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 ALCAMQ13740 583 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 NCAPHQ15003 741 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 CDCA2Q69YH5 1023 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-206ENST00000465525 CENPPQ6IPU0 288 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 TTI2Q6NXR4 508 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 SLC17A8Q8NDX2 589 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 DHX38Q92620 1227 aaKnown RBP18.91■□□□□ 0.62
PTPRU-206ENST00000465525 DUSP9Q99956 384 aaKnown RBP18.91■□□□□ 0.62
PTPRU-206ENST00000465525 INO80BQ9C086 356 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-206ENST00000465525 UBE4BO95155 1302 aa18.91■□□□□ 0.62
PTPRU-206ENST00000465525 DCDC2CA8MYV0 355 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 TGFB1I1O43294 461 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 GPR32O75388 356 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 KIF20AO95235 890 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 CAVIN2O95810 425 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 CD4P01730 458 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 RPLP2P05387 115 aaKnown RBP18.9■□□□□ 0.62
PTPRU-206ENST00000465525 IQCF3P0C7M6 154 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 FGFR4P22455 802 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 PPP1R2P41236 205 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 PHKA2P46019 1235 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 PTENP60484 403 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 NME8Q8N427 588 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 OSMRQ99650 979 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 CCDC113Q9H0I3 377 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 NFE2L3Q9Y4A8 694 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 PHLPP2Q6ZVD8 1323 aa18.9■□□□□ 0.62
PTPRU-206ENST00000465525 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 H0YCG3 227 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 CLIC2O15247 247 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 PQBP1O60828 265 aaKnown RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 THPOP40225 353 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 MBTD1Q05BQ5 628 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 STRN3Q13033 797 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 TPD52L1Q16890 204 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 LRRC26Q2I0M4 334 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 TRIM60Q495X7 471 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 ZCWPW2Q504Y3 356 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 MAP4K3Q8IVH8 894 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 ENOX1Q8TC92 643 aaKnown RBP18.89■□□□□ 0.61
PTPRU-206ENST00000465525 BICD1Q96G01 975 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 FANCLQ9NW38 375 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 KCNG1Q9UIX4 513 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 BICDL2A1A5D9 508 aa18.89■□□□□ 0.61
PTPRU-206ENST00000465525 GOLGA6L3A6NEY3 463 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms