RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 TLE6Q9H808 572 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-225ENST00000465268 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 POTEMA6NI47 508 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 NEMFO60524 1076 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 OFD1O75665 1012 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 EYA4O95677 639 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 MCM7P33993 719 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 SMAD4Q13485 552 aaKnown RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 ADHFE1Q8IWW8 467 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 ASAP3Q8TDY4 903 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 BCL7CQ8WUZ0 217 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 PSPC1Q8WXF1 523 aaKnown RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 TCF25Q9BQ70 676 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 JPH2Q9BR39 696 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 C1QTNF1Q9BXJ1 281 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 INO80BQ9C086 356 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
MRPL55-225ENST00000465268 FNDC1Q4ZHG4 1894 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-225ENST00000465268 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 LYPLA2O95372 231 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 SPATA31C1P0DKV0 1188 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 BCAR1P56945 870 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 KCNC3Q14003 757 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 TRIM29Q14134 588 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 CSPP1Q1MSJ5 1256 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 AGMOQ6ZNB7 445 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 RNF149Q8NC42 400 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 SMRP1Q8NCR6 262 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 MTRQ99707 1265 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 NRDE2Q9H7Z3 1164 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 SPG21Q9NZD8 308 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 PPME1Q9Y570 386 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
MRPL55-225ENST00000465268 ZNF623O75123 536 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 MED24O75448 989 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 RARRES1P49788 294 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 COASYQ13057 564 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 NBR1Q14596 966 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 ZNF174Q15697 407 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 PPP2R3CQ969Q6 453 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 TBC1D13Q9NVG8 400 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 DNAJB4Q9UDY4 337 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 PRKAG3Q9UGI9 489 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 PLXNA4Q9HCM2 1894 aa16.62■□□□□ 0.25
MRPL55-225ENST00000465268 ZC3H11AO75152 810 aaKnown RBP eCLIP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 ARL2P36404 184 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 CAPSQ13938 189 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 AMHR2Q16671 573 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 NOMO2Q5JPE7 1267 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 LLGL2Q6P1M3 1020 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 MRPL10Q7Z7H8 261 aaKnown RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 CATSPER3Q86XQ3 398 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 SMG8Q8ND04 991 aaKnown RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 AUTS2Q8WXX7 1259 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 CPB2Q96IY4 423 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 VN1R3Q9BXE9 311 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 EIF2AQ9BY44 585 aaKnown RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 ENTPD7Q9NQZ7 604 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 CDH22Q9UJ99 828 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 FAM50BQ9Y247 325 aa16.61■□□□□ 0.25
MRPL55-225ENST00000465268 USP15Q9Y4E8 981 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-225ENST00000465268 TSPAN1O60635 241 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 GPR37L1O60883 481 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 DDHD2O94830 711 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 GALTP07902 379 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 GLRA2P23416 452 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 PPM1AP35813 382 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 TECP42680 631 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 SLC11A1P49279 550 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 PTENP60484 403 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 SYCE2Q6PIF2 218 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 MAEAQ7L5Y9 396 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 TMC7Q7Z402 723 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 EXOC8Q8IYI6 725 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 TCP11Q8WWU5 503 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
MRPL55-225ENST00000465268 S1PR5Q9H228 398 aa16.6■□□□□ 0.25
MRPL55-225ENST00000465268 C2orf71A6NGG8 1288 aa16.59■□□□□ 0.25
MRPL55-225ENST00000465268 ASAP2O43150 1006 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms