RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 IRS1P35568 1242 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 PLA2G5P39877 138 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 CCT6AP40227 531 aaKnown RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 TBC1D8BQ0IIM8 1120 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 SMAD4Q13485 552 aaKnown RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 PTPAQ15257 358 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 CLUL1Q15846 466 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 FOXD4L6Q3SYB3 417 aaPredicted RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 KRT79Q5XKE5 535 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 FOXD4L3Q6VB84 417 aaPredicted RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 ANO5Q75V66 913 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 LRRC71Q8N4P6 559 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 EFHBQ8N7U6 833 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 SNX29Q8TEQ0 813 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 POP1Q99575 1024 aaKnown RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 ADAMTS10Q9H324 1103 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 TFIP11Q9UBB9 837 aaKnown RBP19.72■□□□□ 0.75
COL7A1-205ENST00000465238 CD207Q9UJ71 328 aa19.72■□□□□ 0.75
COL7A1-205ENST00000465238 TMEM150BA6NC51 233 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 FAM86C2PA6NEL3 165 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 HOXA2O43364 376 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 MED24O75448 989 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 SPATA31C1P0DKV0 1188 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
COL7A1-205ENST00000465238 NDUFV1P49821 464 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 SLC39A14Q15043 492 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 STK38Q15208 465 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 TARBP2Q15633 366 aaKnown RBP19.71■□□□□ 0.75
COL7A1-205ENST00000465238 ADGRD2Q7Z7M1 963 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 FAM122AQ96E09 287 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 CEP170P1Q96L14 293 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 CCDC43Q96MW1 224 aaKnown RBP19.71■□□□□ 0.75
COL7A1-205ENST00000465238 NACC1Q96RE7 527 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 CYP26B1Q9NR63 512 aa19.71■□□□□ 0.75
COL7A1-205ENST00000465238 TYW1Q9NV66 732 aaKnown RBP19.71■□□□□ 0.75
COL7A1-205ENST00000465238 PRR33A8MZF0 331 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 DCXO43602 365 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 FGF18O76093 207 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 FGFR1P11362 822 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL7A1-205ENST00000465238 MUTP22033 750 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 MARCKSP29966 332 aaPredicted RBP19.7■□□□□ 0.74
COL7A1-205ENST00000465238 NRIP1P48552 1158 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 GPC3P51654 580 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 XKR9Q5GH70 373 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 COLGALT1Q8NBJ5 622 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 MSLNLQ96KJ4 702 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 AK8Q96MA6 479 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 TMEM117Q9H0C3 514 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 TLR9Q9NR96 1032 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 ANKEF1Q9NU02 776 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 ZDHHC9Q9Y397 364 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 PPME1Q9Y570 386 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 ATP6V1DQ9Y5K8 247 aa19.7■□□□□ 0.74
COL7A1-205ENST00000465238 FSD2A1L4K1 749 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 PP2D1A8MPX8 630 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 ZBTB39O15060 712 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 EYA4O95677 639 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 DARSP14868 501 aaKnown RBP19.69■□□□□ 0.74
COL7A1-205ENST00000465238 LAG3P18627 525 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 CDC25AP30304 524 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 LONP1P36776 959 aaKnown RBP19.69■□□□□ 0.74
COL7A1-205ENST00000465238 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-205ENST00000465238 NPEPPSP55786 919 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 NUCB2P80303 420 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 CDC42EP1Q00587 391 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
COL7A1-205ENST00000465238 EXOC8Q8IYI6 725 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 MICAL1Q8TDZ2 1067 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 PIGOQ8TEQ8 1089 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 SCLT1Q96NL6 688 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
COL7A1-205ENST00000465238 CWH43Q9H720 699 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 TLE6Q9H808 572 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 CFAP45Q9UL16 551 aa19.69■□□□□ 0.74
COL7A1-205ENST00000465238 TRIOO75962 3097 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 DNM2P50570 870 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 ZRSR1Q15695 479 aaKnown RBP19.68■□□□□ 0.74
COL7A1-205ENST00000465238 POTEGQ6S5H5 508 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 RBM23Q86U06 439 aaKnown RBP19.68■□□□□ 0.74
COL7A1-205ENST00000465238 ABI1Q8IZP0 508 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 SLC7A3Q8WY07 619 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 CLEC1BQ9P126 229 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 HCSTQ9UBK5 93 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 KIAA1024Q9UPX6 916 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 LZTS1Q9Y250 596 aa19.68■□□□□ 0.74
COL7A1-205ENST00000465238 SRPRBQ9Y5M8 271 aaKnown RBP19.68■□□□□ 0.74
COL7A1-205ENST00000465238 A0A087WWV3 80 aa19.67■□□□□ 0.74
COL7A1-205ENST00000465238 SPTLC2O15270 562 aa19.67■□□□□ 0.74
COL7A1-205ENST00000465238 MAFO75444 373 aaPredicted RBP19.67■□□□□ 0.74
COL7A1-205ENST00000465238 YEATS4O95619 227 aa19.67■□□□□ 0.74
COL7A1-205ENST00000465238 RFC5P40937 340 aa19.67■□□□□ 0.74
COL7A1-205ENST00000465238 UBA7P41226 1012 aa19.67■□□□□ 0.74
COL7A1-205ENST00000465238 POLGP54098 1239 aaPredicted RBP19.67■□□□□ 0.74
COL7A1-205ENST00000465238 DNM1Q05193 864 aaKnown RBP19.67■□□□□ 0.74
COL7A1-205ENST00000465238 COASYQ13057 564 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms