RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 C9IYK1 514 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 HOXA2O43364 376 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 HIP1RO75146 1068 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 ERLIN2O94905 339 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 SRGAP2CP0DJJ0 459 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 PLS3P13797 630 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 SARSP49591 514 aaKnown RBP15.15■□□□□ 0.02
LIMD1-203ENST00000465039 FXR1P51114 621 aaKnown RBP eCLIP15.15■□□□□ 0.02
LIMD1-203ENST00000465039 FAM189BP81408 668 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 MBTD1Q05BQ5 628 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 E2F4Q16254 413 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 SV2BQ7L1I2 683 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 GPBP1Q86WP2 473 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 DEPTORQ8TB45 409 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 LINC01599Q8WXQ3 324 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 RAD9AQ99638 391 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 GPRC5CQ9NQ84 441 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 SEL1LQ9UBV2 794 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 TCHHQ07283 1943 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 CNTNAP2Q9UHC6 1331 aa15.15■□□□□ 0.02
LIMD1-203ENST00000465039 A0A087WWV3 80 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 A0A0U1RQF3 1178 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 LRRIQ4A6NIV6 560 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 ZNF623O75123 536 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 EOMESO95936 686 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
LIMD1-203ENST00000465039 SMTNP53814 917 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 DEFB103AP81534 67 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 AMPD3Q01432 767 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 MAPK6Q16659 721 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-203ENST00000465039 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-203ENST00000465039 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
LIMD1-203ENST00000465039 PPP1R16BQ96T49 567 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 ADAM2Q99965 735 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 FZD8Q9H461 694 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 TMEM134Q9H6X4 195 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 PARVGQ9HBI0 331 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 ARHGAP28Q9P2N2 729 aa15.14■□□□□ 0.01
LIMD1-203ENST00000465039 MYH11P35749 1972 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 TSPAN1O60635 241 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 TBCAO75347 108 aaKnown RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 MYL1P05976 194 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 GAP43P17677 238 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 DNAJB2P25686 324 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 NPTX2P47972 431 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 MCM6Q14566 821 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 AMHR2Q16671 573 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 NOTUMQ6P988 496 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 APBB1IPQ7Z5R6 666 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 RTN4RL1Q86UN2 441 aaPredicted RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 LRRC15Q8TF66 581 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 BSNDQ8WZ55 320 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 PLIN2Q99541 437 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 REEP2Q9BRK0 252 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 PBX4Q9BYU1 374 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 KCNH3Q9ULD8 1083 aa15.13■□□□□ 0.01
LIMD1-203ENST00000465039 PIN4Q9Y237 131 aaKnown RBP15.13■□□□□ 0.01
LIMD1-203ENST00000465039 A0A087X0B3 334 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 CARNS1A5YM72 827 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 ACKR2O00590 384 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 TLL1O43897 1013 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 MGEA5O60502 916 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 KRT18P05783 430 aaKnown RBP15.12■□□□□ 0.01
LIMD1-203ENST00000465039 HOXA11P31270 313 aaPredicted RBP15.12■□□□□ 0.01
LIMD1-203ENST00000465039 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 TIFAQ96CG3 184 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 IPO9Q96P70 1041 aaKnown RBP15.12■□□□□ 0.01
LIMD1-203ENST00000465039 ZBED2Q9BTP6 218 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 ST6GALNAC4Q9H4F1 302 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 KMT5AQ9NQR1 393 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
LIMD1-203ENST00000465039 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 SOX1O00570 391 aaPredicted RBP15.11■□□□□ 0.01
LIMD1-203ENST00000465039 DGKIO75912 1065 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 FAM13AO94988 1023 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 NCKAP1LP55160 1127 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 PEX3P56589 373 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 GIT2Q14161 759 aa15.11■□□□□ 0.01
LIMD1-203ENST00000465039 TWF2Q6IBS0 349 aaKnown RBP15.11■□□□□ 0.01
LIMD1-203ENST00000465039 ZNF598Q86UK7 904 aaKnown RBP15.11■□□□□ 0.01
LIMD1-203ENST00000465039 CMTR2Q8IYT2 770 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms