RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 POLR3GLQ9BT43 218 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 MRPL4Q9BYD3 311 aaKnown RBP5.61□□□□□ -1.51
USH2A-203ENST00000463147 MTFR1LQ9H019 292 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 ADARB2Q9NS39 739 aaKnown RBP5.61□□□□□ -1.51
USH2A-203ENST00000463147 KCNH7Q9NS40 1196 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 GABBR1Q9UBS5 961 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 TRAF6Q9Y4K3 522 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 ZAR1LA6NP61 321 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 GOLGA8BA8MQT2 603 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 IPO13O94829 963 aaKnown RBP5.6□□□□□ -1.51
USH2A-203ENST00000463147 ITGB1P05556 798 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 MMEP08473 750 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 SUMO1P63165 101 aaKnown RBP5.6□□□□□ -1.51
USH2A-203ENST00000463147 TRIM61Q5EBN2 209 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 STRIP1Q5VSL9 837 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 HTR3DQ70Z44 454 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 RHOUQ7L0Q8 258 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 ASB15Q8WXK1 588 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 GBP4Q96PP9 640 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 TCF25Q9BQ70 676 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 SLC52A2Q9HAB3 445 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 SAE1Q9UBE0 346 aaPredicted RBP5.6□□□□□ -1.51
USH2A-203ENST00000463147 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
USH2A-203ENST00000463147 PHLDB1Q86UU1 1377 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 A0A0A6YYK5 440 aaPredicted RBP5.59□□□□□ -1.51
USH2A-203ENST00000463147 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.59□□□□□ -1.51
USH2A-203ENST00000463147 PRAMEF22A3QJZ6 481 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 MASP2O00187 686 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 FOXP2O15409 715 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 ABHD16AO95870 558 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 SDHAP31040 664 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 SOX5P35711 763 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 C21orf58P58505 322 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 SAFB2Q14151 953 aaKnown RBP eCLIP5.59□□□□□ -1.51
USH2A-203ENST00000463147 ZNF460Q14592 562 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 LRRC41Q15345 812 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 SEPT7Q16181 437 aaKnown RBP5.59□□□□□ -1.51
USH2A-203ENST00000463147 GAREM2Q75VX8 874 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 CERS3Q8IU89 383 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 ZC3H7AQ8IWR0 971 aaKnown RBP5.59□□□□□ -1.51
USH2A-203ENST00000463147 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 E2F7Q96AV8 911 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 TOR3AQ9H497 397 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 PCDHA8Q9Y5H6 950 aa5.59□□□□□ -1.51
USH2A-203ENST00000463147 CCDC66A2RUB6 948 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 GOLGA6L22H0YM25 854 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 B3GALT2O43825 422 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 KATNA1O75449 491 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 ALDH1L1O75891 902 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 CDK4P11802 303 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 GABREP78334 506 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 HSP90AB2PQ58FF8 381 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 CT47A1Q5JQC4 288 aaPredicted RBP5.58□□□□□ -1.52
USH2A-203ENST00000463147 FKBP15Q5T1M5 1219 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 ZKSCAN2Q63HK3 967 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 KCNV1Q6PIU1 500 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 BRAPQ7Z569 592 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 PROKR1Q8TCW9 393 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
USH2A-203ENST00000463147 ASPSCR1Q9BZE9 553 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 SMURF1Q9HCE7 757 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 INTS7Q9NVH2 962 aaKnown RBP5.58□□□□□ -1.52
USH2A-203ENST00000463147 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
USH2A-203ENST00000463147 TRPS1Q9UHF7 1281 aa5.58□□□□□ -1.52
USH2A-203ENST00000463147 TNPO3Q9Y5L0 923 aaKnown RBP5.58□□□□□ -1.52
USH2A-203ENST00000463147 ARID4BQ4LE39 1312 aaPredicted RBP5.57□□□□□ -1.52
USH2A-203ENST00000463147 CCDC194A0A1B0GVG4 234 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 SRGAP2CP0DJJ0 459 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 POU3F2P20265 443 aaPredicted RBP5.57□□□□□ -1.52
USH2A-203ENST00000463147 GUCY2FP51841 1108 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 BPIFB4P59827 614 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 TTF1Q15361 905 aaPredicted RBP5.57□□□□□ -1.52
USH2A-203ENST00000463147 NFE2Q16621 373 aaPredicted RBP5.57□□□□□ -1.52
USH2A-203ENST00000463147 LRRC55Q6ZSA7 311 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 ADGRG3Q86Y34 549 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 GPR150Q8NGU9 434 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 MNTQ99583 582 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
USH2A-203ENST00000463147 NDOR1Q9UHB4 597 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 RCAN3Q9UKA8 241 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 DENND2AQ9ULE3 1009 aa5.57□□□□□ -1.52
USH2A-203ENST00000463147 KLRG2A4D1S0 409 aaPredicted RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 SCDO00767 359 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 FAM20BO75063 409 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 HIP1RO75146 1068 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 RECQL4O94761 1208 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 DNM2P50570 870 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 RABGGTBP53611 331 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 MCL1Q07820 350 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 STRN3Q13033 797 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 TCIRG1Q13488 830 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 NAIF1Q69YI7 327 aaPredicted RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 ATXN2LQ8WWM7 1075 aaKnown RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 RPL10LQ96L21 214 aaKnown RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 GPHA2Q96T91 129 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms