RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 RGS18Q9NS28 235 aa10.58□□□□□ -0.72
PKP4-208ENST00000462335 LARSQ9P2J5 1176 aaKnown RBP10.58□□□□□ -0.72
PKP4-208ENST00000462335 FBXO2Q9UK22 296 aaPredicted RBP10.58□□□□□ -0.72
PKP4-208ENST00000462335 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
PKP4-208ENST00000462335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 HIP1RO75146 1068 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 BRD1O95696 1058 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 IGFBP4P22692 258 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 GLRA2P23416 452 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 AXLP30530 894 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 NAMPTP43490 491 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 RAB27AP51159 221 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PTENP60484 403 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 GRB10Q13322 594 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PRPF4BQ13523 1007 aaKnown RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 PKP1Q13835 747 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 MCM6Q14566 821 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PAN2Q504Q3 1202 aaKnown RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 HYIQ5T013 277 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 RINT1Q6NUQ1 792 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 CEP57L1Q8IYX8 460 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 MYCT1Q8N699 235 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PDILTQ8N807 584 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 IQUBQ8NA54 791 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 ASAP3Q8TDY4 903 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 ARNTL2Q8WYA1 636 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 LARP4BQ92615 738 aaKnown RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 RAD54LQ92698 747 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 TCHPQ9BT92 498 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 OSBPL7Q9BZF2 842 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 CERS4Q9HA82 394 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 C17orf75Q9HAS0 396 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 IFT122Q9HBG6 1241 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 POLD4Q9HCU8 107 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 XPNPEP1Q9NQW7 623 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 PRMT7Q9NVM4 692 aaPredicted RBP10.57□□□□□ -0.72
PKP4-208ENST00000462335 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 MTUS1Q9ULD2 1270 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
PKP4-208ENST00000462335 TBKBP1A7MCY6 615 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
PKP4-208ENST00000462335 EOMESO95936 686 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 GRIN1Q05586 938 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 RNASELQ05823 741 aaKnown RBP10.56□□□□□ -0.72
PKP4-208ENST00000462335 CAPSQ13938 189 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 GLB1LQ6UWU2 654 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 Q7L0L9 218 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 CNNM3Q8NE01 707 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 URGCPQ8TCY9 931 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 VWCEQ96DN2 955 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 CCDC51Q96ER9 411 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 BICD1Q96G01 975 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 TGS1Q96RS0 853 aaKnown RBP10.56□□□□□ -0.72
PKP4-208ENST00000462335 TMX1Q9H3N1 280 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 TMEM161AQ9NX61 479 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
PKP4-208ENST00000462335 PCDHB12Q9Y5F1 795 aa10.56□□□□□ -0.72
PKP4-208ENST00000462335 MICAL3Q7RTP6 2002 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 N4BP3O15049 544 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 PRKCBP05771 671 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 ITGA4P13612 1032 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 IDEP14735 1019 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 FOSL2P15408 326 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 ABCD1P33897 745 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 BMS1Q14692 1282 aaKnown RBP10.55□□□□□ -0.72
PKP4-208ENST00000462335 LONRF3Q496Y0 759 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 C1orf186Q6ZWK4 172 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 DYMQ7RTS9 669 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 RTN4RL1Q86UN2 441 aaPredicted RBP10.55□□□□□ -0.72
PKP4-208ENST00000462335 ECHDC2Q86YB7 292 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 FBXO22Q8NEZ5 403 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 DHX58Q96C10 678 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 CPB2Q96IY4 423 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 PRIMPOLQ96LW4 560 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 RUSC1Q9BVN2 902 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 APOL6Q9BWW8 343 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 NFKBIZQ9BYH8 718 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 CUEDC2Q9H467 287 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 ELAC1Q9H777 363 aaKnown RBP10.55□□□□□ -0.72
PKP4-208ENST00000462335 PARVGQ9HBI0 331 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 AGPAT5Q9NUQ2 364 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 FAM105AQ9NUU6 356 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 RCOR1Q9UKL0 485 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 ODF2LQ9ULJ1 636 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 PCDHB2Q9Y5E7 798 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms