RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 DAW1Q8N136 415 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 FIBCD1Q8N539 461 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 SYT2Q8N9I0 419 aaPredicted RBP17.56■□□□□ 0.4
ERCC3-206ENST00000462306 CALML4Q96GE6 196 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 EPSTI1Q96J88 318 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 MTUS1Q9ULD2 1270 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 LRRIQ4A6NIV6 560 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 TSPAN1O60635 241 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 LPXNO60711 386 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 PLA2G4BP0C869 781 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 FGFR1P11362 822 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 ATF7P17544 494 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 PLCG1P19174 1290 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 SLC12A3P55017 1021 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 MAPK7Q13164 816 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 BTG3Q14201 252 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 TWF2Q6IBS0 349 aaKnown RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 KRI1Q8N9T8 703 aaKnown RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 KIFAP3Q92845 792 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 GAS2L1Q99501 681 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-206ENST00000462306 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
ERCC3-206ENST00000462306 HIP1RO75146 1068 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 BRD1O95696 1058 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 EOMESO95936 686 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 GUCY2CP25092 1073 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 NAMPTP43490 491 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 BECN1Q14457 450 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 STK38Q15208 465 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 PAN2Q504Q3 1202 aaKnown RBP17.54■□□□□ 0.4
ERCC3-206ENST00000462306 EPC2Q52LR7 807 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 TMEM192Q8IY95 271 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 SYMPKQ92797 1274 aaKnown RBP17.54■□□□□ 0.4
ERCC3-206ENST00000462306 SAMD11Q96NU1 681 aa17.54■□□□□ 0.4
ERCC3-206ENST00000462306 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
ERCC3-206ENST00000462306 SPTLC2O15270 562 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 ZNF623O75123 536 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 PPP6R2O75170 966 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 ERLIN2O94905 339 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 YEATS4O95619 227 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
ERCC3-206ENST00000462306 POU3F3P20264 500 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-206ENST00000462306 AXLP30530 894 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-206ENST00000462306 ARSHQ5FYA8 562 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FBXO22Q8NEZ5 403 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 CASD1Q96PB1 797 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FZD8Q9H461 694 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FAM105AQ9NUU6 356 aa17.53■□□□□ 0.4
ERCC3-206ENST00000462306 FNDC1Q4ZHG4 1894 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-206ENST00000462306 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 B4GALT5O43286 388 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 SKIP12755 728 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 ARF4P18085 180 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-206ENST00000462306 BMPR1AP36894 532 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 RAB27AP51159 221 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 FAM187BQ17R55 369 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 ATL3Q6DD88 541 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 ZBTB8OSQ8IWT0 167 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 RNF169Q8NCN4 708 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 GDPD5Q8WTR4 605 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 RAD54LQ92698 747 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 CPB2Q96IY4 423 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 IFT74Q96LB3 600 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 DRC1Q96MC2 740 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 KIFC3Q9BVG8 833 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 C2orf40Q9H1Z8 148 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 KCND2Q9NZV8 630 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-206ENST00000462306 PCDHB2Q9Y5E7 798 aa17.52■□□□□ 0.4
ERCC3-206ENST00000462306 C5orf67F2Z3F1 127 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 TRANK1O15050 2925 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 HOXA2O43364 376 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 IGFBP4P22692 258 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 NPTX2P47972 431 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 PEX3P56589 373 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 DNM1Q05193 864 aaKnown RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 NCBP1Q09161 790 aaKnown RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 RAD51AP2Q09MP3 1159 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 MCM6Q14566 821 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 NOTUMQ6P988 496 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 MRPL10Q7Z7H8 261 aaKnown RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 NLRC5Q86WI3 1866 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 RASSF8Q8NHQ8 419 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 MAFAQ8NHW3 353 aaPredicted RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 DEPTORQ8TB45 409 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 LPPQ93052 612 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 CCDC51Q96ER9 411 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms