RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RTFDC1Q9BY42 306 aaPredicted RBP6.29□□□□□ -1.4
COPS3-204ENST00000462236 SMOC1Q9H4F8 434 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 PANK3Q9H999 370 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 SAMD15Q9P1V8 674 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 ECM29Q5VYK3 1845 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 PRAMEF22A3QJZ6 481 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 PAPLNO95428 1278 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 HMOX1P09601 288 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 SRGAP2CP0DJJ0 459 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 TACR1P25103 407 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 PIP4K2AP48426 406 aaPredicted RBP6.28□□□□□ -1.4
COPS3-204ENST00000462236 MAPKAPK2P49137 400 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 NEK4P51957 841 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 YBX1P67809 324 aaKnown RBP6.28□□□□□ -1.4
COPS3-204ENST00000462236 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 DHCR24Q15392 516 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 HLFQ16534 295 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 TMEM177Q53S58 311 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 OVCH1Q7RTY7 1134 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 CTU1Q7Z7A3 348 aaKnown RBP6.28□□□□□ -1.4
COPS3-204ENST00000462236 RNF180Q86T96 592 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 TRIM48Q8IWZ4 208 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 NLGN4XQ8N0W4 816 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 UHMK1Q8TAS1 419 aaKnown RBP6.28□□□□□ -1.4
COPS3-204ENST00000462236 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 CRAMP1Q96RY5 1269 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 CABP5Q9NP86 173 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 CATSPERZQ9NTU4 200 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 PPARGC1AQ9UBK2 798 aaKnown RBP6.28□□□□□ -1.4
COPS3-204ENST00000462236 FBLN5Q9UBX5 448 aa6.28□□□□□ -1.4
COPS3-204ENST00000462236 NIP7Q9Y221 180 aaKnown RBP eCLIP6.28□□□□□ -1.4
COPS3-204ENST00000462236 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 CBX4O00257 560 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 NPHP1O15259 732 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 PYGMP11217 842 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 CPEP16870 476 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
COPS3-204ENST00000462236 GMPSP49915 693 aaPredicted RBP6.27□□□□□ -1.41
COPS3-204ENST00000462236 FXR1P51114 621 aaKnown RBP eCLIP6.27□□□□□ -1.41
COPS3-204ENST00000462236 MECP2P51608 486 aaKnown RBP6.27□□□□□ -1.41
COPS3-204ENST00000462236 HUNKP57058 714 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 ZNF460Q14592 562 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 PTPROQ16827 1216 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 PIK3R6Q5UE93 754 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 STEAP3Q658P3 488 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 ABHD17CQ6PCB6 329 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 HHIPL2Q6UWX4 724 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 DDX46Q7L014 1031 aaKnown RBP6.27□□□□□ -1.41
COPS3-204ENST00000462236 OTOP1Q7RTM1 612 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 MORC1Q86VD1 984 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 KCNJ15Q99712 375 aa6.27□□□□□ -1.41
COPS3-204ENST00000462236 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 SHTN1A0MZ66 631 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 YDJCA8MPS7 323 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 ERVV-1B6SEH8 477 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 GLRX3O76003 335 aaKnown RBP6.26□□□□□ -1.41
COPS3-204ENST00000462236 DNM2P50570 870 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 EPHA5P54756 1037 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 KIF23Q02241 960 aaPredicted RBP6.26□□□□□ -1.41
COPS3-204ENST00000462236 TEFQ10587 303 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
COPS3-204ENST00000462236 ADGRF1Q5T601 910 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 DLK2Q6UY11 383 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 CHST14Q8NCH0 376 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 FAM168AQ92567 244 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 ZNF552Q9H707 407 aaPredicted RBP6.26□□□□□ -1.41
COPS3-204ENST00000462236 B4GALT6Q9UBX8 382 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 DSEQ9UL01 958 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 COQ6Q9Y2Z9 468 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 MYH3P11055 1940 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 DOCK3Q8IZD9 2030 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 COL4A1P02462 1669 aa6.26□□□□□ -1.41
COPS3-204ENST00000462236 ZNF609O15014 1411 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 TTC28Q96AY4 2481 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 F8W031 263 aaPredicted RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 M0R2C6 588 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 PPIP5K2O43314 1243 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 PEX10O60683 326 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 NTSR2O95665 410 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 F2P00734 622 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 PDE6AP16499 860 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 KIAA2012Q0VF49 1180 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 RAB3GAP1Q15042 981 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 FIGNQ5HY92 759 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 CT47A1Q5JQC4 288 aaPredicted RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 RPTNQ6XPR3 784 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 ARHGAP36Q6ZRI8 547 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 OR2W6PQ8NHA6 318 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 TTLL11Q8NHH1 800 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 PIP4K2CQ8TBX8 421 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms