RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 MEI1Q5TIA1 1274 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
COL4A6-204ENST00000461897 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 IFT20Q8IY31 132 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 C10orf67Q8IYJ2 551 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL4A6-204ENST00000461897 CDHR1Q96JP9 859 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 DRC1Q96MC2 740 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 SENP7Q9BQF6 1050 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 LSM14BQ9BX40 385 aaKnown RBP13.55□□□□□ -0.24
COL4A6-204ENST00000461897 GANQ9H2C0 597 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 KCND2Q9NZV8 630 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 TELO2Q9Y4R8 837 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 MYH11P35749 1972 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 NCK2O43639 380 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 CPP00450 1065 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 MYBP10242 640 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 CYP2C8P10632 490 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 ANXA13P27216 316 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 HOXD13P35453 343 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 RARRES1P49788 294 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 ZNF131P52739 623 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 STXBP2Q15833 593 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 DPY19L2P1Q6NXN4 242 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
COL4A6-204ENST00000461897 FGD4Q96M96 766 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 RSPH14Q9UHP6 348 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 TMEM59LQ9UK28 342 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 NFASCO94856 1347 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 TMEM150BA6NC51 233 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 EIF3HO15372 352 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 CELF2O95319 508 aaKnown RBP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 GAP43P17677 238 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 SP2Q02086 613 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 MAPK7Q13164 816 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 PAK2Q13177 524 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 TDRD12Q587J7 1177 aaKnown RBP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 C4orf19Q8IY42 314 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 CAPS2Q9BXY5 557 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 PLCB1Q9NQ66 1216 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 DBR1Q9UK59 544 aaKnown RBP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 ODF2LQ9ULJ1 636 aa13.54□□□□□ -0.24
COL4A6-204ENST00000461897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL4A6-204ENST00000461897 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BTBD19C9JJ37 291 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-204ENST00000461897 HSF2BPO75031 334 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PALMO75781 387 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 FAM13AO94988 1023 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 KLRC1P26715 233 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
COL4A6-204ENST00000461897 CXCR5P32302 372 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ICAM3P32942 547 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 COPB2P35606 906 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PSMC5P62195 406 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BMT2Q1RMZ1 405 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 EFCAB13Q8IY85 973 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 DAW1Q8N136 415 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BRI3BPQ8WY22 251 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ZBTB9Q96C00 473 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 NLRC4Q9NPP4 1024 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 EHD2Q9NZN4 543 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PCDHA10Q9Y5I2 948 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 CCL15-CCL14A0A0B4J2E2 113 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BUB1O43683 1085 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PGK2P07205 417 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 GLI1P08151 1106 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 CETPP11597 493 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 GTF2A2P52657 109 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 CCL15Q16663 113 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
COL4A6-204ENST00000461897 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 EFCC1Q9HA90 598 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 SMARCAL1Q9NZC9 954 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 ZNFX1Q9P2E3 1918 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms