RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 PLS3P13797 630 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 SMTNP53814 917 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 TBC1D8BQ0IIM8 1120 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 EMC2Q15006 297 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 ZNF484Q5JVG2 852 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 SPATA1Q5VX52 437 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 OTOP2Q7RTS6 562 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 TRIM50Q86XT4 487 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 CCDC155Q8N6L0 562 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 KIAA0895Q8NCT3 520 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 IFT74Q96LB3 600 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 FAM161BQ96MY7 647 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 C17orf75Q9HAS0 396 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 H3BRB1 525 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 GAS2O43903 313 aaKnown RBP16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 GCNT3O95395 438 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 ZNF286BP0CG31 522 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 MAPTP10636 758 aaKnown RBP16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 CCNE1P24864 410 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 STX17P56962 302 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 PTK7Q13308 1070 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 ALCAMQ13740 583 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 NOC3LQ8WTT2 800 aaKnown RBP16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 P2RX5Q93086 422 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 PBX4Q9BYU1 374 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 TUT1Q9H6E5 874 aaKnown RBP16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 NFE2L3Q9Y4A8 694 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
TMEM39A-203ENST00000461654 GRXCR1A8MXD5 290 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 ACTN1P12814 892 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 HOXC8P31273 242 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 ABCD1P33897 745 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 CHMP4BP1P59074 171 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 MAPK7Q13164 816 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 PPP2R5AQ15172 486 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 RAB30Q15771 203 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 TCP11Q8WWU5 503 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 DHX33Q9H6R0 707 aaKnown RBP16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 POLD4Q9HCU8 107 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 PCDHA2Q9Y5H9 948 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
TMEM39A-203ENST00000461654 UBE4BO95155 1302 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 COL1A2P08123 1366 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 H0YCG3 227 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 K7ENM7 598 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 SELPP16109 830 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 PBX2P40425 430 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 DNM2P50570 870 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 LRRC63Q05C16 580 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 GPNMBQ14956 572 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 NCAPHQ15003 741 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 DAW1Q8N136 415 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 ANKRD20A12PQ8NF67 263 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 PHOSPHO2Q8TCD6 241 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 ZNF576Q9H609 170 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
TMEM39A-203ENST00000461654 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 MAGEB2O15479 319 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 BAIAP3O94812 1187 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 CKBP12277 381 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 SCP2P22307 547 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 PEX3P56589 373 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 HIC1Q14526 733 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 IER5Q5VY09 327 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 CENPPQ6IPU0 288 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 FOXR2Q6PJQ5 311 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 LRRC8DQ7L1W4 858 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 ZNF720Q7Z2F6 126 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 SERINC5Q86VE9 423 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 FAM114A1Q8IWE2 563 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 RNPEPQ9H4A4 650 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 KMT5AQ9NQR1 393 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 MSRAQ9UJ68 235 aa16.69■□□□□ 0.26
TMEM39A-203ENST00000461654 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 CXCL10P02778 98 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 MYBP10242 640 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 INSRRP14616 1297 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 NMT1P30419 496 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 IGBP1P78318 339 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 SPAG1Q07617 926 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 PPFIA1Q13136 1202 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 TRAF7Q6Q0C0 670 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms