RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SPIRE2Q8WWL2 714 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 SCLT1Q96NL6 688 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 IFIH1Q9BYX4 1025 aaKnown RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 LARSQ9P2J5 1176 aaKnown RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ARHGAP28Q9P2N2 729 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 MICAL3Q7RTP6 2002 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 SLC16A4O15374 487 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TRAK2O60296 914 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 MCM4P33991 863 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 DPYDQ12882 1025 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 DMP1Q13316 513 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TMEM240Q5SV17 173 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ODR4Q5SWX8 454 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TMEM161BQ8NDZ6 487 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 KCNN1Q92952 543 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 INO80BQ9C086 356 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 FZD8Q9H461 694 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 ZHX3Q9H4I2 956 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 KMT5AQ9NQR1 393 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 CCDC169A6NNP5 214 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 GPR182O15218 404 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 EDN1P05305 212 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 MYL1P05976 194 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 PFKMP08237 780 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 IDEP14735 1019 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 GAP43P17677 238 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 HOXA11P31270 313 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-202ENST00000461433 ASIC1P78348 528 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 NFX1Q12986 1120 aaKnown RBP12.44□□□□□ -0.42
SSBP1-202ENST00000461433 COASYQ13057 564 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 PAK2Q13177 524 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 PNOCQ13519 176 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 UNC13DQ70J99 1090 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 RTN4RL1Q86UN2 441 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-202ENST00000461433 HPS3Q969F9 1004 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP1-202ENST00000461433 STRA6Q9BX79 667 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 FGFBP2Q9BYJ0 223 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 C2orf40Q9H1Z8 148 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 PRO3102Q9H379 93 aa12.44□□□□□ -0.42
SSBP1-202ENST00000461433 CEP290O15078 2479 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 PVALEFA0A1B0GWK0 134 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 MGEA5O60502 916 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 KINO60870 393 aaKnown RBP12.43□□□□□ -0.42
SSBP1-202ENST00000461433 FGBP02675 491 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 MAPTP10636 758 aaKnown RBP12.43□□□□□ -0.42
SSBP1-202ENST00000461433 NMT1P30419 496 aaKnown RBP12.43□□□□□ -0.42
SSBP1-202ENST00000461433 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-202ENST00000461433 DSC3Q14574 896 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 POSTNQ15063 836 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 FAM187BQ17R55 369 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-202ENST00000461433 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 ZNF720Q7Z2F6 126 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 HAUS6Q7Z4H7 955 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 CCDC65Q8IXS2 484 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 LINC01599Q8WXQ3 324 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 SEPT8Q92599 483 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 APBB2Q92870 758 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 ST6GALNAC4Q9H4F1 302 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 KCNG1Q9UIX4 513 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 USP20Q9Y2K6 914 aa12.43□□□□□ -0.42
SSBP1-202ENST00000461433 B4GALT5O43286 388 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 TSPAN1O60635 241 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PPP1R37O75864 691 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 SFPQP23246 707 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 BMP8BP34820 402 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 CASP5P51878 434 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 EFNA5P52803 228 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 SMTNP53814 917 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PCBP1Q15365 356 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ZC2HC1CQ53FD0 456 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 CATSPER4Q7RTX7 472 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ZBTB8OSQ8IWT0 167 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 FAM178BQ8IXR5 827 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms