RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 LUC7L2Q9Y383 392 aaKnown RBP5.02□□□□□ -1.61
CLK1-206ENST00000461326 GOLGA8AA7E2F4 631 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 GOLGA8BA8MQT2 603 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 GOLGA6L22H0YM25 854 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 FZD9O00144 591 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 ACOT7O00154 380 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 MAFO75444 373 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 CNOT4O95628 575 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 MT-CO1P00395 513 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 PRLP01236 227 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 MMEP08473 750 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 CT47B1P0C2W7 299 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 INHBCP55103 352 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 NANOS3P60323 173 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 ALDH6A1Q02252 535 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 MOGSQ13724 837 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 FAM102BQ5T8I3 360 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 CD276Q5ZPR3 534 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 CCSAPQ6IQ19 270 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 TEPPQ6URK8 271 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 RTN4RL1Q86UN2 441 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 PNMA8AQ86V59 439 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 GIMAP8Q8ND71 665 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 RTF1Q92541 710 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 FERMT2Q96AC1 680 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 RAX2Q96IS3 184 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 FAXDC2Q96IV6 333 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 LMF1Q96S06 567 aa5.01□□□□□ -1.61
CLK1-206ENST00000461326 CCM2LQ9NUG4 571 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 PNMA8BQ9ULN7 279 aaPredicted RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 ZFR2Q9UPR6 939 aaKnown RBP5.01□□□□□ -1.61
CLK1-206ENST00000461326 KLHL33A6NCF5 533 aa5□□□□□ -1.61
CLK1-206ENST00000461326 RASSF10A6NK89 507 aa5□□□□□ -1.61
CLK1-206ENST00000461326 FOXS1O43638 330 aa5□□□□□ -1.61
CLK1-206ENST00000461326 ENO2P09104 434 aaPredicted RBP5□□□□□ -1.61
CLK1-206ENST00000461326 PTGS1P23219 599 aa5□□□□□ -1.61
CLK1-206ENST00000461326 GPR3P46089 330 aa5□□□□□ -1.61
CLK1-206ENST00000461326 MANFP55145 182 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 BCAR1P56945 870 aa5□□□□□ -1.61
CLK1-206ENST00000461326 SCAND1P57086 179 aa5□□□□□ -1.61
CLK1-206ENST00000461326 MRPS9P82933 396 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 GRIN1Q05586 938 aa5□□□□□ -1.61
CLK1-206ENST00000461326 LSM12Q3MHD2 195 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 VASNQ6EMK4 673 aa5□□□□□ -1.61
CLK1-206ENST00000461326 KIAA1841Q6NSI8 718 aa5□□□□□ -1.61
CLK1-206ENST00000461326 TCTN3Q6NUS6 607 aa5□□□□□ -1.61
CLK1-206ENST00000461326 PGM2L1Q6PCE3 622 aa5□□□□□ -1.61
CLK1-206ENST00000461326 DNAJC10Q8IXB1 793 aa5□□□□□ -1.61
CLK1-206ENST00000461326 RBM12BQ8IXT5 1001 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 RAVER1Q8IY67 606 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 IFNL2Q8IZJ0 200 aa5□□□□□ -1.61
CLK1-206ENST00000461326 MYO1HQ8N1T3 1032 aa5□□□□□ -1.61
CLK1-206ENST00000461326 CPA6Q8N4T0 437 aa5□□□□□ -1.61
CLK1-206ENST00000461326 RPGRQ92834 1020 aaKnown RBP5□□□□□ -1.61
CLK1-206ENST00000461326 EDAQ92838 391 aa5□□□□□ -1.61
CLK1-206ENST00000461326 FOXRED1Q96CU9 486 aaPredicted RBP5□□□□□ -1.61
CLK1-206ENST00000461326 GNRHR2Q96P88 292 aa5□□□□□ -1.61
CLK1-206ENST00000461326 TUBGCP5Q96RT8 1024 aa5□□□□□ -1.61
CLK1-206ENST00000461326 RHOBTB2Q9BYZ6 727 aa5□□□□□ -1.61
CLK1-206ENST00000461326 BTBD7Q9P203 1132 aa5□□□□□ -1.61
CLK1-206ENST00000461326 ANKRD6Q9Y2G4 727 aa5□□□□□ -1.61
CLK1-206ENST00000461326 A0A087X1B8 175 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 ZNF839A8K0R7 811 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 PRC1O43663 620 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 NARSO43776 548 aaKnown RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 LRG1P02750 347 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 ZSCAN20P17040 1043 aaPredicted RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 COMTP21964 271 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 SLC5A3P53794 718 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 TBX4P57082 545 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 CCDC178Q5BJE1 867 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 SLFN12LQ6IEE8 588 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 CCAR1Q8IX12 1150 aaKnown RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 ZNF496Q96IT1 587 aaPredicted RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 RTFDC1Q9BY42 306 aaPredicted RBP4.99□□□□□ -1.61
CLK1-206ENST00000461326 INCENPQ9NQS7 918 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 DLL4Q9NR61 685 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 SLC4A7Q9Y6M7 1214 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 NUMBLQ9Y6R0 609 aa4.99□□□□□ -1.61
CLK1-206ENST00000461326 XPOTO43592 962 aaKnown RBP4.98□□□□□ -1.61
CLK1-206ENST00000461326 PRPF6O94906 941 aaKnown RBP4.98□□□□□ -1.61
CLK1-206ENST00000461326 CYP2C19P33261 490 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 ADCY2Q08462 1091 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 GTF2H3Q13889 308 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 PDCD1Q15116 288 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 UGT8Q16880 541 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.98□□□□□ -1.61
CLK1-206ENST00000461326 ANO4Q32M45 955 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 GJC2Q5T442 439 aaPredicted RBP4.98□□□□□ -1.61
CLK1-206ENST00000461326 EFCAB2Q5VUJ9 269 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 PRAMEF9Q5VWM5 478 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 IGFL4Q6B9Z1 124 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 KANSL1Q7Z3B3 1105 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 WDR75Q8IWA0 830 aaKnown RBP4.98□□□□□ -1.61
CLK1-206ENST00000461326 MAGEB6Q8N7X4 407 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 NUDT10Q8NFP7 164 aa4.98□□□□□ -1.61
CLK1-206ENST00000461326 JPH3Q8WXH2 748 aaPredicted RBP4.98□□□□□ -1.61
CLK1-206ENST00000461326 ERCC4Q92889 916 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms