RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 PCDHB6Q9Y5E3 794 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 USP34Q70CQ2 3546 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 PTPRZ1P23471 2315 aaPredicted RBP16.45■□□□□ 0.22
NCK1-202ENST00000460960 C2CD4DB7Z1M9 353 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 GALR2O43603 387 aaPredicted RBP16.45■□□□□ 0.22
NCK1-202ENST00000460960 STX6O43752 255 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 PSMD10O75832 226 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 WEE2P0C1S8 567 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
NCK1-202ENST00000460960 PPM1AP35813 382 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 CLCN3P51790 818 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 KCNC3Q14003 757 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 ZNF668Q96K58 619 aaPredicted RBP16.45■□□□□ 0.22
NCK1-202ENST00000460960 SCLT1Q96NL6 688 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 CASD1Q96PB1 797 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 UNC45AQ9H3U1 944 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 MFSD1Q9H3U5 465 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 POMKQ9H5K3 350 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
NCK1-202ENST00000460960 SPG21Q9NZD8 308 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 SORCS3Q9UPU3 1222 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
NCK1-202ENST00000460960 IGKV6D-21A0A0A0MT36 114 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 CHMP2AO43633 222 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 C22orf31O95567 290 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 BRD1O95696 1058 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
NCK1-202ENST00000460960 PDCP20941 246 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 FAM189BP81408 668 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 SMC1AQ14683 1233 aaKnown RBP16.44■□□□□ 0.22
NCK1-202ENST00000460960 RARS2Q5T160 578 aaKnown RBP16.44■□□□□ 0.22
NCK1-202ENST00000460960 LRCH2Q5VUJ6 765 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 UBALD2Q8IYN6 164 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 PIAS4Q8N2W9 510 aaPredicted RBP16.44■□□□□ 0.22
NCK1-202ENST00000460960 C4orf32Q8N8J7 132 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 MAP7D2Q96T17 732 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 SMOC2Q9H3U7 446 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 HCFC2Q9Y5Z7 792 aa16.44■□□□□ 0.22
NCK1-202ENST00000460960 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 EML1O00423 815 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 NEMFO60524 1076 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 GPR32O75388 356 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 ASGR2P07307 311 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
NCK1-202ENST00000460960 DSC3Q14574 896 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 B3GNT9Q6UX72 402 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
NCK1-202ENST00000460960 ASCL5Q7RTU5 278 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
NCK1-202ENST00000460960 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 MTMR9Q96QG7 549 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 RNF19AQ9NV58 838 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 SAMM50Q9Y512 469 aa16.43■□□□□ 0.22
NCK1-202ENST00000460960 CFAP54Q96N23 3096 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 GAS7O60861 476 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 ATP4AP20648 1035 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 MTHFRP42898 656 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 ITIH3Q06033 890 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 SPIRE1Q08AE8 756 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 BECN1Q14457 450 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 BMS1Q14692 1282 aaKnown RBP16.42■□□□□ 0.22
NCK1-202ENST00000460960 CALCRLQ16602 461 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 ECHDC2Q86YB7 292 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 LRRC71Q8N4P6 559 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 C12orf76Q8N812 135 aaPredicted RBP16.42■□□□□ 0.22
NCK1-202ENST00000460960 TMEM105Q8N8V8 129 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 TDRD5Q8NAT2 981 aaKnown RBP16.42■□□□□ 0.22
NCK1-202ENST00000460960 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 RIT2Q99578 217 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 DBR1Q9UK59 544 aaKnown RBP16.42■□□□□ 0.22
NCK1-202ENST00000460960 ZDHHC9Q9Y397 364 aa16.42■□□□□ 0.22
NCK1-202ENST00000460960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.41■□□□□ 0.22
NCK1-202ENST00000460960 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
NCK1-202ENST00000460960 CXCL14O95715 111 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 PSAPP07602 524 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 TMOD1P28289 359 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 NUBP1P53384 320 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 IL17AQ16552 155 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 UGCGQ16739 394 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 MRPL43Q8N983 215 aaKnown RBP16.41■□□□□ 0.22
NCK1-202ENST00000460960 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 CHAMP1Q96JM3 812 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 TEKT3Q9BXF9 490 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
NCK1-202ENST00000460960 LIMD1Q9UGP4 676 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 NOL7Q9UMY1 257 aaKnown RBP16.41■□□□□ 0.22
NCK1-202ENST00000460960 CEP131Q9UPN4 1083 aa16.41■□□□□ 0.22
NCK1-202ENST00000460960 PRR23AA6NEV1 266 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms