RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-205ENST00000460485 STXBP2Q15833 593 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 SLC18A3Q16572 532 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 KLHDC7AQ5VTJ3 777 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 SMYD5Q6GMV2 418 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 MIS18BP1Q6P0N0 1132 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 TRAPPC11Q7Z392 1133 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 UBE2Q1Q7Z7E8 422 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 CTAGE6Q86UF2 777 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 CTAGE4Q8IX94 777 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 DAW1Q8N136 415 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 OPTNQ96CV9 577 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
ERCC3-205ENST00000460485 A1CFQ9NQ94 594 aaKnown RBP15.39■□□□□ 0.05
ERCC3-205ENST00000460485 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 SLC9A2Q9UBY0 812 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 INTUQ9ULD6 942 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 SAR1BQ9Y6B6 198 aa15.39■□□□□ 0.05
ERCC3-205ENST00000460485 DOCK5Q9H7D0 1870 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 IRF6O14896 467 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 EPHB6O15197 1021 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 EIF3JO75822 258 aaKnown RBP15.38■□□□□ 0.05
ERCC3-205ENST00000460485 SLC25A27O95847 323 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 UCHL3P15374 230 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 KCNA2P16389 499 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 MAGEA1P43355 309 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 BFSP1Q12934 665 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-205ENST00000460485 RAPGEF1Q13905 1077 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 VGLL4Q14135 290 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 ERCC6LQ2NKX8 1250 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-205ENST00000460485 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 ERO1BQ86YB8 467 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 SH3TC2Q8TF17 1288 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 NOX5Q96PH1 765 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 RNF14Q9UBS8 474 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 IGSF9BQ9UPX0 1349 aa15.38■□□□□ 0.05
ERCC3-205ENST00000460485 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 TLR2O60603 784 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 EXOC3O60645 756 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 ERLIN1O75477 346 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 TCP1P17987 556 aaKnown RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 PON1P27169 355 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 FMO5P49326 533 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 LACTBP83111 547 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 BRD3Q15059 726 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 XKR3Q5GH77 459 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 CCDC70Q6NSX1 233 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 XXYLT1Q8NBI6 393 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 BRI3BPQ8WY22 251 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 TSC1Q92574 1164 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 FAM81BQ96LP2 452 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 NTPCRQ9BSD7 190 aaKnown RBP15.37■□□□□ 0.05
ERCC3-205ENST00000460485 NLRC4Q9NPP4 1024 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 USP20Q9Y2K6 914 aa15.37■□□□□ 0.05
ERCC3-205ENST00000460485 LAMA3Q16787 3333 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 CCDC151A5D8V7 595 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 CCNE2O96020 404 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 TGFB3P10600 412 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 CAPN2P17655 700 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 STAT1P42224 750 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 GJA8P48165 433 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 JAM2P57087 298 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 MYL7Q01449 175 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 PPIL2Q13356 520 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 BMS1Q14692 1282 aaKnown RBP15.36■□□□□ 0.05
ERCC3-205ENST00000460485 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 HAUS6Q7Z4H7 955 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 MAP4K3Q8IVH8 894 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 EXOC8Q8IYI6 725 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 MSANTD4Q8NCY6 345 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 IRX2Q9BZI1 471 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-205ENST00000460485 PKD2L1Q9P0L9 805 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 KCNH4Q9UQ05 1017 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 RIPK3Q9Y572 518 aa15.36■□□□□ 0.05
ERCC3-205ENST00000460485 CCL15-CCL14A0A0B4J2E2 113 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 NKRFO15226 690 aaKnown RBP eCLIP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 CLIC2O15247 247 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 GJB1P08034 283 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 GTF2H1P32780 548 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 CCL15Q16663 113 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 ZC2HC1CQ53FD0 456 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 FBXO38Q6PIJ6 1188 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 FASTKD5Q7L8L6 764 aaKnown RBP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 ZNF572Q7Z3I7 529 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-205ENST00000460485 IFT74Q96LB3 600 aa15.35■□□□□ 0.05
ERCC3-205ENST00000460485 STK33Q9BYT3 514 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms