RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 AK8Q96MA6 479 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 PLIN2Q99541 437 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 PLVAPQ9BX97 442 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 MTMR6Q9Y217 621 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 NLRC5Q86WI3 1866 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 PDIA4P13667 645 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 AXLP30530 894 aa20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 RESTQ13127 1097 aa20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 LONRF3Q496Y0 759 aa20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 DEPTORQ8TB45 409 aa20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 TYW1Q9NV66 732 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 CLIC4Q9Y696 253 aa20.02■□□□□ 0.8
PDLIM2-215ENST00000456545 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 COL4A6Q14031 1691 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 C5orf67F2Z3F1 127 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 NAALADL2Q58DX5 795 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 FAM173BQ6P4H8 233 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 NOTUMQ6P988 496 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 KCTD17Q8N5Z5 321 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 HELQQ8TDG4 1101 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 KIFAP3Q92845 792 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 MRPL38Q96DV4 380 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 MMTAG2Q9BU76 263 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 TRAIPQ9BWF2 469 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 NFKBIZQ9BYH8 718 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 TRIM6Q9C030 488 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 C2orf40Q9H1Z8 148 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 POLD4Q9HCU8 107 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 PCDHB2Q9Y5E7 798 aa20.01■□□□□ 0.79
PDLIM2-215ENST00000456545 CHD9Q3L8U1 2897 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 LIG1P18858 919 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 MBTD1Q05BQ5 628 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 FOXD4L5Q5VV16 416 aaPredicted RBP20■□□□□ 0.79
PDLIM2-215ENST00000456545 IFNLR1Q8IU57 520 aaPredicted RBP20■□□□□ 0.79
PDLIM2-215ENST00000456545 FOXD4L4Q8WXT5 416 aaPredicted RBP20■□□□□ 0.79
PDLIM2-215ENST00000456545 LPPQ93052 612 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 CPB2Q96IY4 423 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 CASD1Q96PB1 797 aa20■□□□□ 0.79
PDLIM2-215ENST00000456545 ALG13Q9NP73 1137 aaKnown RBP20■□□□□ 0.79
PDLIM2-215ENST00000456545 SLC26A4O43511 780 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 TSPAN1O60635 241 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 ZNF623O75123 536 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 CSPG5O95196 566 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 LAG3P18627 525 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 MARCKSP29966 332 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 HOXA11P31270 313 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 NAMPTP43490 491 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 GLB1LQ6UWU2 654 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 ZNF598Q86UK7 904 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 THNSL1Q8IYQ7 743 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 KLHL23Q8NBE8 558 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 CNNM3Q8NE01 707 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 P2RX5Q93086 422 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 MRPL9Q9BYD2 267 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 LMAN2LQ9H0V9 348 aa19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 PRMT7Q9NVM4 692 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 FNDC1Q4ZHG4 1894 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-215ENST00000456545 COL4A4P53420 1690 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 CCDC169A6NNP5 214 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 GRM6O15303 877 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 RNASELQ05823 741 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 MAPK6Q16659 721 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 CSPP1Q1MSJ5 1256 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 CLLU1OSQ5K130 101 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 HYIQ5T013 277 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 RINT1Q6NUQ1 792 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 HACE1Q8IYU2 909 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 CCDC51Q96ER9 411 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 DRC1Q96MC2 740 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 PNMA5Q96PV4 448 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 PRDM6Q9NQX0 595 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 THEGQ9P2T0 379 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 PLAGL2Q9UPG8 496 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 INPP5FQ9Y2H2 1132 aa19.98■□□□□ 0.79
PDLIM2-215ENST00000456545 LINC00271P0C7V0 271 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 PLA2G4BP0C869 781 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 ITGA4P13612 1032 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 ATF7P17544 494 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 DHX8Q14562 1220 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 TIGD5Q53EQ6 642 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 KCNK18Q7Z418 384 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 SYT2Q8N9I0 419 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 COLGALT1Q8NBJ5 622 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 MICAL1Q8TDZ2 1067 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 RSPH1Q8WYR4 309 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 BSNDQ8WZ55 320 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 ZNF558Q96NG5 402 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 TIPINQ9BVW5 301 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 CSRNP2Q9H175 543 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 RNF19AQ9NV58 838 aa19.97■□□□□ 0.79
PDLIM2-215ENST00000456545 HIP1RO75146 1068 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 ARF4P18085 180 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 TXLNAP40222 546 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 EFNA5P52803 228 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms