RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CCNB1P14635 433 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PSMC6P62333 389 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CKAP4Q07065 602 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GLYCTKQ8IVS8 523 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 METTL25Q8N6Q8 603 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 KLHL23Q8NBE8 558 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 WHAMMQ8TF30 809 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 MAML1Q92585 1016 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 C9orf72Q96LT7 481 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ERP44Q9BS26 406 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 KRT23Q9C075 422 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GPR88Q9GZN0 384 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 RHBDL2Q9NX52 303 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 USP15Q9Y4E8 981 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 DCCP43146 1447 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 WDR19Q8NEZ3 1342 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SSU72P8A0A1W2PR75 194 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ASAP2O43150 1006 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 PGM3O95394 542 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 PDE4DQ08499 809 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ALCAMQ13740 583 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 WTAPQ15007 396 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 CNPY1Q3B7I2 92 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ALKBH5Q6P6C2 394 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 PLPPR3Q6T4P5 718 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ARHGAP22Q7Z5H3 698 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 REM2Q8IYK8 340 aaPredicted RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 C7orf43Q8WVR3 580 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ESR2Q92731 530 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 BTBD6Q96KE9 485 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 POLR3CQ9BUI4 534 aaPredicted RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 PPP1R12CQ9BZL4 782 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 CCSER1Q9C0I3 900 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 HEY1Q9Y5J3 304 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ARFGEF2Q9Y6D5 1785 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 A0A1W2PPM1 405 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ZNF862O60290 1169 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 UBTFL6P0CB48 400 aaPredicted RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 PYGMP11217 842 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 HARSP12081 509 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 GTF2H1P32780 548 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 MTIF2P46199 727 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 GALCP54803 685 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 NEXNQ0ZGT2 675 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 OVGP1Q12889 678 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 MSLNQ13421 630 aaPredicted RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 KPNB1Q14974 876 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 UBE3CQ15386 1083 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 TDRD12Q587J7 1177 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ODF2Q5BJF6 829 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 C4orf50Q6ZRC1 276 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 MAIP1Q8WWC4 291 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 FMO2Q99518 471 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 MOV10L1Q9BXT6 1211 aaKnown RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 MMADHCQ9H3L0 296 aaPredicted RBP4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ARMCX1Q9P291 453 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 DOLKQ9UPQ8 538 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 ATP6V0A2Q9Y487 856 aa4.9□□□□□ -1.62
DEPDC1-202ENST00000456315 CACNA1SQ13698 1873 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TMCO5BA8MYB1 307 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 KLRF2D3W0D1 207 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TDP2O95551 362 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TFPTP0C1Z6 253 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TAL1P17542 331 aaPredicted RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CCND1P24385 295 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC5A2P31639 672 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 PRPHP41219 470 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CPA2P48052 419 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 LSAMPQ13449 338 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CTTNQ14247 550 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 PPM1KQ8N3J5 372 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 RASGEF1CQ8N431 466 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 PLBD2Q8NHP8 589 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 SCFD1Q8WVM8 642 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 KIFAP3Q92845 792 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 RBM38Q9H0Z9 239 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 EMILIN3Q9NT22 766 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM260Q9NX78 707 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 NIP7Q9Y221 180 aaKnown RBP eCLIP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CACNA1CQ13936 2221 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 H0YIN7 160 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 BUD23O43709 281 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 ADAM23O75077 832 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TOP3BO95985 862 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 LYNP07948 512 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CDK4P11802 303 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 GABRB3P28472 473 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TECP42680 631 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 DLG1Q12959 904 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 BIRC3Q13489 604 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 RRP1BQ14684 758 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 ALX1Q15699 326 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 LRRC36Q1X8D7 754 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CDHR3Q6ZTQ4 885 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 NELFCDQ8IXH7 590 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 RNF10Q8N5U6 811 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 PIGOQ8TEQ8 1089 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms