RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 HAUS3Q68CZ6 603 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 PGBD4Q96DM1 585 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 POLR3CQ9BUI4 534 aaPredicted RBP19.89■□□□□ 0.77
MSH6-207ENST00000456246 TLR9Q9NR96 1032 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 BMP2KQ9NSY1 1161 aaPredicted RBP19.89■□□□□ 0.77
MSH6-207ENST00000456246 STK24Q9Y6E0 443 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 ZBTB39O15060 712 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 ERLIN2O94905 339 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 NCBP1Q09161 790 aaKnown RBP19.88■□□□□ 0.77
MSH6-207ENST00000456246 ZNF174Q15697 407 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 PTCRAQ6ISU1 281 aaPredicted RBP19.88■□□□□ 0.77
MSH6-207ENST00000456246 KCNT2Q6UVM3 1135 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 GLB1LQ6UWU2 654 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 EP400NLQ6ZTU2 488 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
MSH6-207ENST00000456246 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.88■□□□□ 0.77
MSH6-207ENST00000456246 CCDC51Q96ER9 411 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 NACC1Q96RE7 527 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 XPNPEP1Q9NQW7 623 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 DBR1Q9UK59 544 aaKnown RBP19.88■□□□□ 0.77
MSH6-207ENST00000456246 PLXNA4Q9HCM2 1894 aa19.88■□□□□ 0.77
MSH6-207ENST00000456246 RPA1P27694 616 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 AXLP30530 894 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 TECP42680 631 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 PTENP60484 403 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 KRT17Q04695 432 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 LRRC55Q6ZSA7 311 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 MCPH1Q8NEM0 835 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 HELQQ8TDG4 1101 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 MRPS27Q92552 414 aaKnown RBP19.87■□□□□ 0.77
MSH6-207ENST00000456246 TMX3Q96JJ7 454 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 NECAB3Q96P71 396 aaPredicted RBP19.87■□□□□ 0.77
MSH6-207ENST00000456246 CDCA3Q99618 268 aaPredicted RBP19.87■□□□□ 0.77
MSH6-207ENST00000456246 NFKBIZQ9BYH8 718 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 RAB34Q9BZG1 259 aa19.87■□□□□ 0.77
MSH6-207ENST00000456246 CNTNAP2Q9UHC6 1331 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 GRXCR2A6NFK2 248 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 H3BQ06 376 aaPredicted RBP19.86■□□□□ 0.77
MSH6-207ENST00000456246 LAD1O00515 517 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 IRS1P35568 1242 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.771e-7■■■■■ 27.2
MSH6-207ENST00000456246 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 EFHBQ8N7U6 833 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 CNNM3Q8NE01 707 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 MICAL1Q8TDZ2 1067 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 SPG21Q9NZD8 308 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 HCSTQ9UBK5 93 aa19.86■□□□□ 0.77
MSH6-207ENST00000456246 USO1O60763 962 aaKnown RBP19.85■□□□□ 0.77
MSH6-207ENST00000456246 CSPG5O95196 566 aa19.85■□□□□ 0.77
MSH6-207ENST00000456246 ARL2P36404 184 aa19.85■□□□□ 0.77
MSH6-207ENST00000456246 ALDH7A1P49419 539 aaKnown RBP19.85■□□□□ 0.77
MSH6-207ENST00000456246 MINDY3Q9H8M7 445 aa19.85■□□□□ 0.77
MSH6-207ENST00000456246 NGRNQ9NPE2 291 aaKnown RBP19.85■□□□□ 0.77
MSH6-207ENST00000456246 PCDHB2Q9Y5E7 798 aa19.85■□□□□ 0.77
MSH6-207ENST00000456246 FSCN2O14926 492 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 MED24O75448 989 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 LTBRP36941 435 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 NDUFV1P49821 464 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 ADAM15Q13444 863 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 CAPSQ13938 189 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 PDIA5Q14554 519 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 BMS1Q14692 1282 aaKnown RBP19.84■□□□□ 0.77
MSH6-207ENST00000456246 NOMO2Q5JPE7 1267 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 NOTUMQ6P988 496 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 MRPL10Q7Z7H8 261 aaKnown RBP19.84■□□□□ 0.77
MSH6-207ENST00000456246 URGCPQ8TCY9 931 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 IGFLR1Q9H665 355 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 TLE6Q9H808 572 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 UBN1Q9NPG3 1134 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 PRKAG3Q9UGI9 489 aa19.84■□□□□ 0.77
MSH6-207ENST00000456246 ARHGEF35A5YM69 484 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 INO80B-WBP1J3KQ70 363 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 IL9P15248 144 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 HOXA11P31270 313 aaPredicted RBP19.83■□□□□ 0.77
MSH6-207ENST00000456246 NRIP1P48552 1158 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 RILPL1Q5EBL4 403 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 ADGRD2Q7Z7M1 963 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 FAM178BQ8IXR5 827 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 SLC39A11Q8N1S5 342 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 C4orf32Q8N8J7 132 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 ASAP3Q8TDY4 903 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 TMEM169Q96HH4 297 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 POLR3FQ9H1D9 316 aaPredicted RBP19.83■□□□□ 0.77
MSH6-207ENST00000456246 ENTPD7Q9NQZ7 604 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 KANSL3Q9P2N6 904 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 DAXXQ9UER7 740 aaPredicted RBP19.83■□□□□ 0.77
MSH6-207ENST00000456246 STK39Q9UEW8 545 aa19.83■□□□□ 0.77
MSH6-207ENST00000456246 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.83■□□□□ 0.77
MSH6-207ENST00000456246 H3BQV1 296 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 TSPAN1O60635 241 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 TBX10O75333 385 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 OFD1O75665 1012 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 SRGAP2BP0DMP2 458 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 NCLP19338 710 aaKnown RBP19.82■□□□□ 0.76
MSH6-207ENST00000456246 GLRA2P23416 452 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 PRPHP41219 470 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 BCAR1P56945 870 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms