RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 KIF17Q9P2E2 1029 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 COPG2Q9UBF2 871 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ATP6V1HQ9UI12 483 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FBXL5Q9UKA1 691 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PCDHA12Q9UN75 941 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 STX11O75558 287 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MTX1Q13505 466 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TSGA10IPQ3SY00 556 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PHC3Q8NDX5 983 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 INPP5DQ92835 1189 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 CHD1O14646 1710 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 DOCK7Q96N67 2140 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ZNF263O14978 683 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 SLC16A3O15427 465 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 POLR2MP0CAP2 368 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FAM26FQ5R3K3 315 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ACBD5Q5T8D3 534 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MYD88Q99836 296 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ZBED4O75132 1171 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 IFNAR1P17181 557 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 VHLP40337 213 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 JAK3P52333 1124 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 C1orf146Q5VVC0 180 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 SNF8Q96H20 258 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 RBBP8Q99708 897 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 COPRSQ9NQ92 184 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PICK1Q9NRD5 415 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GCNT4Q9P109 453 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ARID5AQ03989 594 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ARMCX4Q5H9R4 360 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TMIEQ8NEW7 156 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MAGOHBQ96A72 148 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 DHX36Q9H2U1 1008 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PARVGQ9HBI0 331 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 AKAP7Q9P0M2 348 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PMLP29590 882 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 IRX5P78411 483 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 STX5Q13190 355 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MTFR1Q15390 333 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FAM47CQ5HY64 1035 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PYROXD1Q8WU10 500 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 STARD8Q92502 1023 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PDS5AQ29RF7 1337 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 NCKAP5LQ9HCH0 1330 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MUTP22033 750 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 WASHC5Q12768 1159 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 NCLNQ969V3 563 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 DACT3Q96B18 629 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 HDAC11Q96DB2 347 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 MRPL1Q9BYD6 325 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PA2G4Q9UQ80 394 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FLT1P17948 1338 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TRPC5OSA6NMA1 111 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 BIRC5O15392 142 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PPP1R37O75864 691 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GSTA3Q16772 222 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FAM45BPQ6NSW5 357 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 SHQ1Q6PI26 577 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 CYFIP1Q7L576 1253 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PM20D2Q8IYS1 436 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 SLC7A3Q8WY07 619 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TMEM237Q96Q45 408 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ZC3H12CQ9C0D7 883 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PCDHB15Q9Y5E8 787 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 NLRP1Q9C000 1473 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 LGALS16A8MUM7 142 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GSTA4O15217 222 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PEX5P50542 639 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 CCDC15Q0P6D6 951 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 C1DQ13901 141 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ERAP1Q9NZ08 941 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 AMACRQ9UHK6 382 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 HPS5Q9UPZ3 1129 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TRAF3IP3Q9Y228 551 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ATP5J2-PTCD1G3V325 749 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GPAA1O43292 621 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 PTCD1O75127 700 aaKnown RBP5.53□□□□□ -1.52
CSMD3-204ENST00000455883 SASH1O94885 1247 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 ATICP31939 592 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 STAT5AP42229 794 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 STAT5BP51692 787 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 GABPAQ06546 454 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 EDRF1Q3B7T1 1238 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 TNNI3KQ59H18 835 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 HECTD3Q5T447 861 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FAM92BQ6ZTR7 304 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 AP3S1Q92572 193 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 FPGT-TNNI3KV9GXZ4 949 aa5.53□□□□□ -1.52
CSMD3-204ENST00000455883 CENPXA8MT69 81 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ECDO95905 644 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DSG1Q02413 1049 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TYW1BQ6NUM6 668 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF354CQ86Y25 554 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms