RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 RBPJLQ9UBG7 517 aa6.46□□□□□ -1.38
CUL3-208ENST00000454323 PUF60Q9UHX1 559 aaKnown RBP6.46□□□□□ -1.38
CUL3-208ENST00000454323 FBXO10Q9UK96 956 aa6.46□□□□□ -1.38
CUL3-208ENST00000454323 LUC7L2Q9Y383 392 aaKnown RBP6.46□□□□□ -1.38
CUL3-208ENST00000454323 REXO2Q9Y3B8 237 aaKnown RBP6.46□□□□□ -1.38
CUL3-208ENST00000454323 COMMD10Q9Y6G5 202 aa6.46□□□□□ -1.38
CUL3-208ENST00000454323 SLC27A2O14975 620 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 U2AF1L5P0DN76 240 aaPredicted RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 MYBL2P10244 700 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 IARSP41252 1262 aaKnown RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 SESN3P58005 492 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 KRT85P78386 507 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 U2AF1Q01081 240 aaKnown RBP eCLIP6.45□□□□□ -1.38
CUL3-208ENST00000454323 GRIN1Q05586 938 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 NFYCQ13952 458 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 TMEM240Q5SV17 173 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 TPH2Q8IWU9 490 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 CLRN3Q8NCR9 226 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 FBXO41Q8TF61 875 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 LARP4BQ92615 738 aaKnown RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 AHCYL2Q96HN2 611 aaKnown RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 NELFAQ9H3P2 528 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 OBP2AQ9NY56 170 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 PNMA8BQ9ULN7 279 aaPredicted RBP6.45□□□□□ -1.38
CUL3-208ENST00000454323 GIT1Q9Y2X7 761 aa6.45□□□□□ -1.38
CUL3-208ENST00000454323 PTPDC1A2A3K4 754 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 CCDC66A2RUB6 948 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 SOD2P04179 222 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ETV4P43268 484 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PFKPQ01813 784 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 OS9Q13438 667 aaPredicted RBP6.44□□□□□ -1.38
CUL3-208ENST00000454323 TCIRG1Q13488 830 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PCBP2Q15366 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
CUL3-208ENST00000454323 VPS72Q15906 364 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ARHGAP44Q17R89 818 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 FAM47CQ5HY64 1035 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PHF19Q5T6S3 580 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PPP4R4Q6NUP7 873 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 SLC4A10Q6U841 1118 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 C16orf59Q7L2K0 433 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 OTOP1Q7RTM1 612 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ADGRE4PQ86SQ3 457 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 C11orf74Q86VG3 221 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ULK2Q8IYT8 1036 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 CPA6Q8N4T0 437 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 C1orf162Q8NEQ5 155 aaPredicted RBP6.44□□□□□ -1.38
CUL3-208ENST00000454323 PIP4K2CQ8TBX8 421 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 FBXW5Q969U6 566 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 NAF1Q96HR8 494 aaKnown RBP6.44□□□□□ -1.38
CUL3-208ENST00000454323 FAXDC2Q96IV6 333 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 AGAP2Q99490 1192 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PLA2G12BQ9BX93 195 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 IPPKQ9H8X2 491 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 ANKRD6Q9Y2G4 727 aa6.44□□□□□ -1.38
CUL3-208ENST00000454323 PLSCR1O15162 318 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 GSTA4O15217 222 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 ARHGAP6O43182 974 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 TGM5O43548 720 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 SNUPNO95149 360 aaKnown RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 MT-CO1P00395 513 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 RBP3P10745 1247 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 FBLP22087 321 aaKnown RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 RECQLP46063 649 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 LACTBP83111 547 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 TUSC3Q13454 348 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 RNF151Q2KHN1 245 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 KSR2Q6VAB6 950 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 TSHZ1Q6ZSZ6 1077 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 HDGFL2Q7Z4V5 671 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 THEMISQ8N1K5 641 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 EFHBQ8N7U6 833 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 UHMK1Q8TAS1 419 aaKnown RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 SLC5A5Q92911 643 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 MPHOSPH6Q99547 160 aaKnown RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 DPYSL5Q9BPU6 564 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 TLR9Q9NR96 1032 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 OXSMQ9NWU1 459 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 H2AFY2Q9P0M6 372 aaPredicted RBP6.43□□□□□ -1.38
CUL3-208ENST00000454323 NESP48681 1621 aa6.43□□□□□ -1.38
CUL3-208ENST00000454323 VSTM5A8MXK1 200 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 FAM47E-STBD1D6RA91 191 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 LDHAP00338 332 aaKnown RBP6.42□□□□□ -1.38
CUL3-208ENST00000454323 CCND1P24385 295 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 DNM2P50570 870 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 HNRNPA0Q13151 305 aaKnown RBP6.42□□□□□ -1.38
CUL3-208ENST00000454323 LRCH2Q5VUJ6 765 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 OTOP3Q7RTS5 596 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.42□□□□□ -1.38
CUL3-208ENST00000454323 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
CUL3-208ENST00000454323 CLEC4DQ8WXI8 215 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 CBLCQ9ULV8 474 aa6.42□□□□□ -1.38
CUL3-208ENST00000454323 TRIM75PA6NK02 468 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms