RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 URGCPQ8TCY9 931 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 CDH22Q9UJ99 828 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 PPME1Q9Y570 386 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 CNTNAP2Q9UHC6 1331 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 SPTBN4Q9H254 2564 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 WDR81Q562E7 1941 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 MYO10Q9HD67 2058 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 NT5C1B-RDH14C9J2C7 533 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 MSH4O15457 936 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 STAMQ92783 540 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 NXPE3Q969Y0 559 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 TMEM175Q9BSA9 504 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 RNF26Q9BY78 433 aaPredicted RBP16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 NRDE2Q9H7Z3 1164 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 PIN4Q9Y237 131 aaKnown RBP16.07■□□□□ 0.16
LYSMD3-202ENST00000453259 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 ADD1P35611 737 aaKnown RBP16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 CLCN4P51793 760 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 Q4G0T1 1027 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 TMC5Q6UXY8 1006 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 FRMD5Q7Z6J6 570 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 TMEM173Q86WV6 379 aaPredicted RBP16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 C12orf76Q8N812 135 aaPredicted RBP16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 WNT16Q9UBV4 365 aa16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
LYSMD3-202ENST00000453259 DKC1O60832 514 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 MAFO75444 373 aaPredicted RBP16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 OFD1O75665 1012 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 PSMD10O75832 226 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 PAPLNO95428 1278 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 WEE2P0C1S8 567 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 ID4P47928 161 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 UGCGQ16739 394 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 FLCNQ8NFG4 579 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 KCNK12Q9HB15 430 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 AGPAT5Q9NUQ2 364 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 FBXL21Q9UKT6 434 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 GVINP1Q7Z2Y8 2422 aa16.05■□□□□ 0.16
LYSMD3-202ENST00000453259 CYP3A7-CYP3A51PA0A087WV96 503 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 A0A087WZ62 844 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 ALDH2P05091 517 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 ADH1AP07327 375 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 FGFR4P22455 802 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 CYP3A7P24462 503 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 KLRC2P26717 231 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 SLC11A1P49279 550 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 ANGPT1Q15389 498 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 MTERF2Q49AM1 385 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 B3GNT9Q6UX72 402 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 CATSPER4Q7RTX7 472 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 MIER3Q7Z3K6 550 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 MRPL10Q7Z7H8 261 aaKnown RBP16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 GPR65Q8IYL9 337 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 ADSSL1Q8N142 457 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 DTWD2Q8NBA8 298 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 AUTS2Q8WXX7 1259 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 TCEANC2Q96MN5 208 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 UNC45AQ9H3U1 944 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 SMOC2Q9H3U7 446 aa16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 SUCLA2Q9P2R7 463 aaPredicted RBP16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
LYSMD3-202ENST00000453259 VPS13AQ96RL7 3174 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 CHMP2AO43633 222 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 GAS2O43903 313 aaKnown RBP16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 LILRB3O75022 631 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 URODP06132 367 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 CNPP09543 421 aaKnown RBP16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 IFNAR1P17181 557 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 NPR3P17342 541 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 DRP2Q13474 957 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 SRGAP1Q7Z6B7 1085 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 RHPN2Q8IUC4 686 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 BCL7CQ8WUZ0 217 aaPredicted RBP16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 SLC7A3Q8WY07 619 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 BORCS6Q96GS4 357 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 RSAD1Q9HA92 442 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 EPS15L1Q9UBC2 864 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 INPP5FQ9Y2H2 1132 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 PCDHB2Q9Y5E7 798 aa16.03■□□□□ 0.16
LYSMD3-202ENST00000453259 CACNA1AO00555 2505 aa16.02■□□□□ 0.16
LYSMD3-202ENST00000453259 INPPL1O15357 1258 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms