RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 C1orf146Q5VVC0 180 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SEC16BQ96JE7 1060 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 RIOK1Q9BRS2 568 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 TRIM56Q9BRZ2 755 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 TRIM9Q9C026 710 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 EPN3Q9H201 632 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 GALCP54803 685 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ALDH18A1P54886 795 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 ARHGAP4P98171 946 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 PCGF5Q86SE9 256 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ERICH1Q86X53 443 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 IWS1Q96ST2 819 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 DHX36Q9H2U1 1008 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZHX2Q9Y6X8 837 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 IQSEC2Q5JU85 1478 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 HMGB2P26583 209 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 GPS1Q13098 491 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 CIAPIN1Q6FI81 312 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 HDAC7Q8WUI4 952 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 KAZALD1Q96I82 304 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SLC38A10Q9HBR0 1119 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 PI4KBQ9UBF8 816 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 COPEO14579 308 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZBTB5O15062 677 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 BBOX1O75936 387 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 UBTFL6P0CB48 400 aaPredicted RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 PTPAQ15257 358 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 NBPF9Q3BBW0 867 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 GLE1Q53GS7 698 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 CCDC188H7C350 402 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZWINTO95229 277 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 TOB1P50616 345 aaPredicted RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 EIF3BP55884 814 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 KCTD2Q14681 263 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 KDELC2Q7Z4H8 507 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SGMS1Q86VZ5 419 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 AFAP1L2Q8N4X5 818 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 CCDC33Q8N5R6 958 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZNF507Q8TCN5 953 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 XPO6Q96QU8 1125 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 NRBP2Q9NSY0 501 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 NARFQ9UHQ1 456 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 FZD1Q9UP38 647 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 PVALEFA0A1B0GWK0 134 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ESYT2A0FGR8 921 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 WDR64B1ANS9 1081 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ENO1P06733 434 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 H2AFXP16104 143 aaPredicted RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 GARSP41250 739 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 PMS1P54277 932 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 OVGP1Q12889 678 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 CENPUQ71F23 418 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 LRRC34Q8IZ02 419 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 CYFIP2Q96F07 1278 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 NUDCD1Q96RS6 583 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 BNIP3LO60238 219 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 KDSRQ06136 332 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SPP2Q13103 211 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 PTGISQ16647 500 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SHCBP1LQ9BZQ2 653 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 LACRTQ9GZZ8 138 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SUDS3Q9H7L9 328 aaPredicted RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 SH3GLB2Q9NR46 395 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 ZBED1O96006 694 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 GCFC2P16383 781 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 YWHAEP62258 255 aaKnown RBP8.28□□□□□ -1.08
RIF1-206ENST00000453091 SPARCL1Q14515 664 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 SWSAP1Q6NVH7 229 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 TRAIPQ9BWF2 469 aa8.28□□□□□ -1.08
RIF1-206ENST00000453091 USP42Q9H9J4 1324 aaKnown RBP8.27□□□□□ -1.08
RIF1-206ENST00000453091 MYL1P05976 194 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.08
RIF1-206ENST00000453091 ARFIP2P53365 341 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 SPATA21Q7Z572 469 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 CDKL2Q92772 493 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 CXorf56Q9H5V9 222 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 TMEM206Q9H813 350 aa8.27□□□□□ -1.08
RIF1-206ENST00000453091 DENND3A2RUS2 1198 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 HSPA4LO95757 839 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 SCP2P22307 547 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 PRELPP51888 382 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 MASTLQ96GX5 879 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 ANKRD36BP1Q96IX9 119 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 PRPSAP2O60256 369 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 P4HA1P13674 534 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 POLR2BP30876 1174 aaKnown RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 VAMP7P51809 220 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 SATB1Q01826 763 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 CDC26Q8NHZ8 85 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 EPS8L3Q8TE67 593 aaKnown RBP8.27□□□□□ -1.09
RIF1-206ENST00000453091 WRNIP1Q96S55 665 aa8.27□□□□□ -1.09
RIF1-206ENST00000453091 AGPAT1Q99943 283 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms