RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 EAF2Q96CJ1 260 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 KAZALD1Q96I82 304 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 NBPF4Q96M43 638 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZDHHC15Q96MV8 337 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 NEK1Q96PY6 1258 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 WDR24Q96S15 920 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 TUBB2BQ9BVA1 445 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 FTOQ9C0B1 505 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 EPC1Q9H2F5 836 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 PHAXQ9H814 394 aaKnown RBP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ANKZF1Q9H8Y5 726 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ARFGAP3Q9NP61 516 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 INTS13Q9NVM9 706 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPT2Q9UMR5 302 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPP2R2CQ9Y2T4 447 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 PIK3C2AO00443 1686 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 LMO7Q8WWI1 1683 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ADAMTS7Q9UKP4 1686 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 MAP3K15Q6ZN16 1313 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 LTBP3Q9NS15 1303 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 EIF3CLB5ME19 914 aaKnown RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 CBFA2T2O43439 604 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 STX10O60499 249 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 CUTAO60888 179 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 URI1O94763 535 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 SMC2O95347 1197 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 TUBBP07437 444 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ITGA4P13612 1032 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 FDPSP14324 419 aaKnown RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF16P17020 682 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF18P17022 549 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 CMA1P23946 247 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 AARSP49588 968 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 NDUFA8P51970 172 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 GYS2P54840 703 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF394Q53GI3 561 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 LRRC31Q6UY01 552 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 LIPIQ6XZB0 460 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 Q6ZUG5 572 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 STOX1Q6ZVD7 989 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 SRGAP1Q7Z6B7 1085 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ADAT2Q7Z6V5 191 aaKnown RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 SAPCD2Q86UD0 394 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 CPNE8Q86YQ8 564 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 C10orf67Q8IYJ2 551 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 TAB3Q8N5C8 712 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 TC2NQ8N9U0 490 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 MNS1Q8NEH6 495 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ALG3Q92685 438 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 GOLGA1Q92805 767 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF274Q96GC6 653 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 GPATCH3Q96I76 525 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 TCEANC2Q96MN5 208 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 CEP89Q96ST8 783 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 MYCBPQ99417 103 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 EIF3CQ99613 913 aaKnown RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 GPR20Q99678 358 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 MCMBPQ9BTE3 642 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 UTP14AQ9BVJ6 771 aaKnown RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF214Q9UL59 606 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 JRKLQ9Y4A0 524 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 OVOS2A0A0G2JMS6 1433 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF609O15014 1411 aa4.69□□□□□ -1.66
HMGB3P22-202ENST00000451823 SIPA1L3O60292 1781 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A087WUV0 522 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PTPDC1A2A3K4 754 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 SH3D21A4FU49 640 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 H3BQV1 296 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 SHOX2O60902 331 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPFIA4O75335 1185 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PRPF6O94906 941 aaKnown RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 SLC3A2P08195 630 aaKnown RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 CYP21A2P08686 494 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 GLI4P10075 376 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ATP1A3P13637 1013 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ATP5JP18859 108 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF76P36508 570 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PBX1P40424 430 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 GTF2A1P52655 376 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 HTRA3P83110 453 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 MYL5Q02045 173 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 EFEMP1Q12805 493 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 DPY19L1Q2PZI1 675 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 GNPTABQ3T906 1256 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 TTC31Q49AM3 519 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 HHIPL2Q6UWX4 724 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 MMS22LQ6ZRQ5 1243 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 RPAINQ86UA6 219 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 AACSQ86V21 672 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 HOMER1Q86YM7 354 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 CERS3Q8IU89 383 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 RBBP8NLQ8NC74 664 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ADCY4Q8NFM4 1077 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 FAM71BQ8TC56 605 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 KCNG4Q8TDN1 519 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms