RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PHF7Q9BWX1 381 aaPredicted RBP30.35■■■□□ 2.45
USP42-204ENST00000451154 DHX33Q9H6R0 707 aaKnown RBP30.35■■■□□ 2.45
USP42-204ENST00000451154 BMP2KQ9NSY1 1161 aaPredicted RBP30.35■■■□□ 2.45
USP42-204ENST00000451154 FAM105AQ9NUU6 356 aa30.35■■■□□ 2.45
USP42-204ENST00000451154 MEIS3P2A8K0S8 358 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 ZBTB39O15060 712 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 LARGE1O95461 756 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 SKIP12755 728 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 CTTNQ14247 550 aaKnown RBP30.34■■■□□ 2.45
USP42-204ENST00000451154 ANKRD54Q6NXT1 300 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 C4orf19Q8IY42 314 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 MRPL43Q8N983 215 aaKnown RBP30.34■■■□□ 2.45
USP42-204ENST00000451154 SUSD6Q92537 303 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 RPGRIP1Q96KN7 1286 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 S1PR5Q9H228 398 aa30.34■■■□□ 2.45
USP42-204ENST00000451154 WDFY4Q6ZS81 3184 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 TECTAO75443 2155 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 BAG4O95429 457 aaKnown RBP30.33■■■□□ 2.45
USP42-204ENST00000451154 SRGAP2BP0DMP2 458 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 YWHABP31946 246 aaKnown RBP30.33■■■□□ 2.45
USP42-204ENST00000451154 KRT2P35908 639 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 SYCE2Q6PIF2 218 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 INPP5FQ9Y2H2 1132 aa30.33■■■□□ 2.45
USP42-204ENST00000451154 C2orf71A6NGG8 1288 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 ZNF623O75123 536 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 ZC3H11AO75152 810 aaKnown RBP eCLIP30.32■■■□□ 2.44
USP42-204ENST00000451154 OFD1O75665 1012 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 RFC5P40937 340 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 CYP4A11Q02928 519 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 SPIRE1Q08AE8 756 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 LAMTOR4Q0VGL1 99 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 SMC1AQ14683 1233 aaKnown RBP30.32■■■□□ 2.44
USP42-204ENST00000451154 HFE2Q6ZVN8 426 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 EXOC8Q8IYI6 725 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 SLFN12Q8IYM2 578 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 PSPC1Q8WXF1 523 aaKnown RBP30.32■■■□□ 2.44
USP42-204ENST00000451154 EDAQ92838 391 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 TNFRSF25Q93038 417 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 MINDY3Q9H8M7 445 aa30.32■■■□□ 2.44
USP42-204ENST00000451154 CXCL14O95715 111 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 CA8P35219 290 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 CBX2Q14781 532 aaPredicted RBP30.31■■■□□ 2.44
USP42-204ENST00000451154 XKR9Q5GH70 373 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 NOMO2Q5JPE7 1267 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 GLB1LQ6UWU2 654 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 OTUD6AQ7L8S5 288 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 TPH2Q8IWU9 490 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 GTF3C6Q969F1 213 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 TMEM169Q96HH4 297 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 ZSWIM4Q9H7M6 989 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 NRDE2Q9H7Z3 1164 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 TBC1D13Q9NVG8 400 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 PPME1Q9Y570 386 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 PCDHB2Q9Y5E7 798 aa30.31■■■□□ 2.44
USP42-204ENST00000451154 FOSBP53539 338 aa30.3■■■□□ 2.44
USP42-204ENST00000451154 SRGAP1Q7Z6B7 1085 aa30.3■■■□□ 2.44
USP42-204ENST00000451154 TMEM173Q86WV6 379 aaPredicted RBP30.3■■■□□ 2.44
USP42-204ENST00000451154 BRMS1Q9HCU9 246 aa30.3■■■□□ 2.44
USP42-204ENST00000451154 AGPAT5Q9NUQ2 364 aa30.3■■■□□ 2.44
USP42-204ENST00000451154 CLASP2O75122 1294 aaKnown RBP30.29■■■□□ 2.44
USP42-204ENST00000451154 SLITRK3O94933 977 aa30.29■■■□□ 2.44
USP42-204ENST00000451154 RAB27AP51159 221 aa30.29■■■□□ 2.44
USP42-204ENST00000451154 RNASELQ05823 741 aaKnown RBP30.29■■■□□ 2.44
USP42-204ENST00000451154 EMC2Q15006 297 aa30.29■■■□□ 2.44
USP42-204ENST00000451154 VPS52Q8N1B4 723 aa30.29■■■□□ 2.44
USP42-204ENST00000451154 NSUN7Q8NE18 718 aaKnown RBP30.29■■■□□ 2.44
USP42-204ENST00000451154 GBP3Q9H0R5 595 aa30.29■■■□□ 2.44
USP42-204ENST00000451154 BTBD18B2RXH4 712 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 JAK2O60674 1132 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 GALTP07902 379 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 HOXA11P31270 313 aaPredicted RBP30.28■■■□□ 2.44
USP42-204ENST00000451154 NEK4P51957 841 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 AUTS2Q8WXX7 1259 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 PGBD4Q96DM1 585 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 HCFC2Q9Y5Z7 792 aa30.28■■■□□ 2.44
USP42-204ENST00000451154 HOXB8P17481 243 aaPredicted RBP30.27■■■□□ 2.44
USP42-204ENST00000451154 AGMOQ6ZNB7 445 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 FERMT3Q86UX7 667 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 ZNF280BQ86YH2 543 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 RNF149Q8NC42 400 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 BCL7CQ8WUZ0 217 aaPredicted RBP30.27■■■□□ 2.44
USP42-204ENST00000451154 TCP11Q8WWU5 503 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 RSPH1Q8WYR4 309 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 CASP10Q92851 521 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 IGSF21Q96ID5 467 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 EIF2AK1Q9BQI3 630 aaKnown RBP30.27■■■□□ 2.44
USP42-204ENST00000451154 DNAJB4Q9UDY4 337 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 PCDHA12Q9UN75 941 aa30.27■■■□□ 2.44
USP42-204ENST00000451154 ASAP2O43150 1006 aa30.26■■■□□ 2.43
USP42-204ENST00000451154 HOXD11P31277 338 aaPredicted RBP30.26■■■□□ 2.43
USP42-204ENST00000451154 AFF1P51825 1210 aaKnown RBP30.26■■■□□ 2.43
USP42-204ENST00000451154 BMS1Q14692 1282 aaKnown RBP30.26■■■□□ 2.43
USP42-204ENST00000451154 CALCRLQ16602 461 aa30.26■■■□□ 2.43
USP42-204ENST00000451154 UBXN11Q5T124 520 aa30.26■■■□□ 2.43
USP42-204ENST00000451154 MRPL10Q7Z7H8 261 aaKnown RBP30.26■■■□□ 2.43
USP42-204ENST00000451154 MTRQ99707 1265 aa30.26■■■□□ 2.43
USP42-204ENST00000451154 CDH22Q9UJ99 828 aa30.26■■■□□ 2.43
USP42-204ENST00000451154 WNT7AO00755 349 aa30.25■■■□□ 2.43
USP42-204ENST00000451154 GAS2O43903 313 aaKnown RBP30.25■■■□□ 2.43
USP42-204ENST00000451154 B4GALT3O60512 393 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms