RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ZEB2O60315 1214 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ATP1A3P13637 1013 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 COL9A1P20849 921 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 HOXD13P35453 343 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CLCN3P51790 818 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 GTF2BQ00403 316 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 DRP2Q13474 957 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CAPSQ13938 189 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 HSP90AA4PQ58FG1 418 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 IER5Q5VY09 327 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ANKRD40Q6AI12 368 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MAP4K3Q8IVH8 894 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CSGALNACT2Q8N6G5 542 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 LINC01465Q8N7H1 131 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 RETREG2Q8NC44 543 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 TMEM161BQ8NDZ6 487 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 LMBR1Q8WVP7 490 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 PSPC1Q8WXF1 523 aaKnown RBP13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ANP32BQ92688 251 aaKnown RBP13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 FAM161BQ96MY7 647 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MTG1Q9BT17 334 aaPredicted RBP13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 THAP9Q9H5L6 903 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 SAMSN1Q9NSI8 373 aaKnown RBP13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
HLA-DRB9-201ENST00000449413 NRCAMQ92823 1304 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 DENND3A2RUS2 1198 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 RRN3P2A6NIE6 340 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 LRRIQ4A6NIV6 560 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 PDXKO00764 312 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MAGEB2O15479 319 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 AP5Z1O43299 807 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 COL6A1P12109 1028 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 SCP2P22307 547 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ABCD1P33897 745 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 SPAG1Q07617 926 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KCNA1Q09470 495 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 GNASQ5JWF2 1037 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MTHFD1LQ6UB35 978 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 LRRC55Q6ZSA7 311 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ZC3H3Q8IXZ2 948 aaKnown RBP13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KLHDC9Q8NEP7 349 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MAFAQ8NHW3 353 aaPredicted RBP13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KCNN1Q92952 543 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CALUO43852 315 aaPredicted RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 HOXC8P31273 242 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 DNM2P50570 870 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CHMP4BP1P59074 171 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MXD4Q14582 209 aaPredicted RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MARCH8Q5T0T0 291 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CDCA2Q69YH5 1023 aaPredicted RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 HS2ST1Q7LGA3 356 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 FAM114A1Q8IWE2 563 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 DEPTORQ8TB45 409 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 MAP7D2Q96T17 732 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 GBP3Q9H0R5 595 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 TMEM206Q9H813 350 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 SUGCTQ9HAC7 445 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
HLA-DRB9-201ENST00000449413 KCNJ18B7U540 433 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 TGFB1I1O43294 461 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 ADCY5O95622 1261 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 NR2F2P24468 414 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 KLRC1P26715 233 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 FANCCQ00597 558 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 TFDP1Q14186 410 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 KCNJ12Q14500 433 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 NFIL3Q16649 462 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 CCSAPQ6IQ19 270 aaPredicted RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 NFRKBQ6P4R8 1299 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 CXCL17Q6UXB2 119 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 RNF180Q86T96 592 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 PCSK9Q8NBP7 692 aaKnown RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 GOLGA5Q8TBA6 731 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 CEP63Q96MT8 703 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 SRRTQ9BXP5 876 aaKnown RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 TBX20Q9UMR3 447 aa13.95□□□□□ -0.18
HLA-DRB9-201ENST00000449413 EXOC7Q9UPT5 735 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms