RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 CFAP65Q6ZU64 1925 aaKnown RBP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 EIF3HO15372 352 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 APBA3O96018 575 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 CDC27P30260 824 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 SERPINB4P48594 390 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 KCNB1Q14721 858 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 ALX1Q15699 326 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 NAALADL2Q58DX5 795 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 EPHA10Q5JZY3 1008 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 IZUMO3Q5VZ72 239 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 GLYCTKQ8IVS8 523 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 THNSL1Q8IYQ7 743 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 CCNYL1Q8N7R7 359 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 OR6B3Q8NGW1 331 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 DPF2Q92785 391 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 CCT8L2Q96SF2 557 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 ADA2Q9NZK5 511 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 SLC13A4Q9UKG4 626 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
NEDD9-204ENST00000448183 USP6P35125 1406 aa8.28□□□□□ -1.08
NEDD9-204ENST00000448183 F8W8V4 182 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 PCYT1AP49585 367 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 VAMP7P51809 220 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 PRELPP51888 382 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 RARS2Q5T160 578 aaKnown RBP8.27□□□□□ -1.08
NEDD9-204ENST00000448183 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 PASD1Q8IV76 773 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.08
NEDD9-204ENST00000448183 INTS2Q9H0H0 1204 aaKnown RBP8.27□□□□□ -1.08
NEDD9-204ENST00000448183 CYP4F11Q9HBI6 524 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.08
NEDD9-204ENST00000448183 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.27□□□□□ -1.08
NEDD9-204ENST00000448183 USP21Q9UK80 565 aa8.27□□□□□ -1.08
NEDD9-204ENST00000448183 A0A1B0GTH6 734 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 POTECB2RU33 542 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 FOXN1O15353 648 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 CLDN3O15551 220 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ATP2C1P98194 919 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 NCAPHQ15003 741 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 SGMS1Q86VZ5 419 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ANKRD7Q92527 254 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 IP6K2Q9UHH9 426 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 UBE4BO95155 1302 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 CCDC195A0A1B0GUA6 201 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 FOXP2O15409 715 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 IGKV5-2P06315 115 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 MYBL1P10243 752 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 TBXAS1P24557 533 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 EFTUD2Q15029 972 aaKnown RBP eCLIP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 METTL16Q86W50 562 aaKnown RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 NLRP4Q96MN2 994 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 SH3GL3Q99963 347 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ASAP2O43150 1006 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 SERPINB2P05120 415 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 PGM1P36871 562 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 HDAC4P56524 1084 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 LRIG3Q6UXM1 1119 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 CCNI2Q6ZMN8 369 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 TRIM72Q6ZMU5 477 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 GCOM2Q9BZD3 368 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 DBNDD1Q9H9R9 158 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 STX18Q9P2W9 335 aaKnown RBP8.27□□□□□ -1.09
NEDD9-204ENST00000448183 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 ERBB3P21860 1342 aa8.27□□□□□ -1.09
NEDD9-204ENST00000448183 EIF4E1BA6NMX2 242 aaKnown RBP8.26□□□□□ -1.09
NEDD9-204ENST00000448183 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 TCP11X1B4DZS4 312 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 SDC4P31431 198 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 IFNA8P32881 189 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 RWDD4Q6NW29 188 aaKnown RBP8.26□□□□□ -1.09
NEDD9-204ENST00000448183 ENOSF1Q7L5Y1 443 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 RASGRP2Q7LDG7 609 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 CCDC90BQ9GZT6 254 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 ATP6V0A4Q9HBG4 840 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 CYP2D6P10635 497 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 NPR1P16066 1061 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 ATICP31939 592 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
NEDD9-204ENST00000448183 BCAR1P56945 870 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF699Q32M78 642 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 HABP4Q5JVS0 413 aaKnown RBP8.26□□□□□ -1.09
NEDD9-204ENST00000448183 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
NEDD9-204ENST00000448183 CATSPER1Q8NEC5 780 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms