RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 IFNLR1Q8IU57 520 aaPredicted RBP27.69■■■□□ 2.02
UFD1-204ENST00000447868 BSNDQ8WZ55 320 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 RNF19AQ9NV58 838 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 PRRC2BQ5JSZ5 2229 aaKnown RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 H3BNC9 293 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 HOXA2O43364 376 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 TSPAN1O60635 241 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 ATF7P17544 494 aaPredicted RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 MARCKSP29966 332 aaPredicted RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 HOXA11P31270 313 aaPredicted RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 UBA7P41226 1012 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 HYIQ5T013 277 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 SPOUT1Q5T280 376 aaKnown RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 ZNF598Q86UK7 904 aaKnown RBP27.68■■■□□ 2.02
UFD1-204ENST00000447868 ABI1Q8IZP0 508 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 NT5C3AQ9H0P0 336 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 FAM105AQ9NUU6 356 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 TRANK1O15050 2925 aa27.68■■■□□ 2.02
UFD1-204ENST00000447868 EOMESO95936 686 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 SSBP05455 408 aaKnown RBP eCLIP27.67■■■□□ 2.02
UFD1-204ENST00000447868 LONP1P36776 959 aaKnown RBP27.67■■■□□ 2.02
UFD1-204ENST00000447868 LPPQ93052 612 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 CPB2Q96IY4 423 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 CASD1Q96PB1 797 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 RUSC1Q9BVN2 902 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 TRAIPQ9BWF2 469 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 NFKBIZQ9BYH8 718 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 TMEM117Q9H0C3 514 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 HCSTQ9UBK5 93 aa27.67■■■□□ 2.02
UFD1-204ENST00000447868 SKIP12755 728 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 RAB27AP51159 221 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 TMEM119Q4V9L6 283 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 CLLU1OSQ5K130 101 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 SLC17A8Q8NDX2 589 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 HELQQ8TDG4 1101 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 CALML4Q96GE6 196 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 USP28Q96RU2 1077 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 C11orf84Q9BUA3 381 aaPredicted RBP27.66■■■□□ 2.02
UFD1-204ENST00000447868 TYW1Q9NV66 732 aaKnown RBP27.66■■■□□ 2.02
UFD1-204ENST00000447868 PCDHB2Q9Y5E7 798 aa27.66■■■□□ 2.02
UFD1-204ENST00000447868 MYH15Q9Y2K3 1946 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 C5orf67F2Z3F1 127 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 RB1P06400 928 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 NCBP1Q09161 790 aaKnown RBP27.65■■■□□ 2.02
UFD1-204ENST00000447868 PCBP1Q15365 356 aaKnown RBP eCLIP27.65■■■□□ 2.02
UFD1-204ENST00000447868 RINT1Q6NUQ1 792 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 ZBTB8OSQ8IWT0 167 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 RASSF8Q8NHQ8 419 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 KIFAP3Q92845 792 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 IFT74Q96LB3 600 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 CSRNP2Q9H175 543 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 LMCD1Q9NZU5 365 aa27.65■■■□□ 2.02
UFD1-204ENST00000447868 B4GALT5O43286 388 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 PPP2R5AQ15172 486 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 AMHR2Q16671 573 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 SPECC1Q5M775 1068 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 UBXN11Q5T124 520 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 CDCA2Q69YH5 1023 aaPredicted RBP27.64■■■□□ 2.02
UFD1-204ENST00000447868 DEPTORQ8TB45 409 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 PLVAPQ9BX97 442 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 PRDM6Q9NQX0 595 aa27.64■■■□□ 2.02
UFD1-204ENST00000447868 FBXO2Q9UK22 296 aaPredicted RBP27.64■■■□□ 2.02
UFD1-204ENST00000447868 MEIS3P2A8K0S8 358 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 HIP1RO75146 1068 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 PLA2G4BP0C869 781 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 ZSCAN22P10073 491 aaPredicted RBP27.63■■■□□ 2.01
UFD1-204ENST00000447868 ARF4P18085 180 aaPredicted RBP27.63■■■□□ 2.01
UFD1-204ENST00000447868 LIG1P18858 919 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 AXLP30530 894 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 NAMPTP43490 491 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 KARSQ15046 597 aaKnown RBP27.63■■■□□ 2.01
UFD1-204ENST00000447868 SKIV2LQ15477 1246 aaKnown RBP27.63■■■□□ 2.01
UFD1-204ENST00000447868 PTPROQ16827 1216 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 NOTUMQ6P988 496 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 C1orf186Q6ZWK4 172 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 KCTD17Q8N5Z5 321 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 CLIC6Q96NY7 704 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 KIFC3Q9BVG8 833 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 C2orf40Q9H1Z8 148 aa27.63■■■□□ 2.01
UFD1-204ENST00000447868 GRM6O15303 877 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 SLC26A4O43511 780 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 ZNF623O75123 536 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 CSPG5O95196 566 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 RAD51AP2Q09MP3 1159 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 LRRC55Q6ZSA7 311 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 LRRC43Q8N309 656 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 SYT2Q8N9I0 419 aaPredicted RBP27.62■■■□□ 2.01
UFD1-204ENST00000447868 PGBD4Q96DM1 585 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 MRPL38Q96DV4 380 aaKnown RBP27.62■■■□□ 2.01
UFD1-204ENST00000447868 EIF2AQ9BY44 585 aaKnown RBP27.62■■■□□ 2.01
UFD1-204ENST00000447868 CWH43Q9H720 699 aa27.62■■■□□ 2.01
UFD1-204ENST00000447868 ALG13Q9NP73 1137 aaKnown RBP27.62■■■□□ 2.01
UFD1-204ENST00000447868 SRPRBQ9Y5M8 271 aaKnown RBP27.62■■■□□ 2.01
UFD1-204ENST00000447868 PRUNE2Q8WUY3 3088 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 PDIA4P13667 645 aaKnown RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 SLC12A3P55017 1021 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 PKP1Q13835 747 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 SLC39A14Q15043 492 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 FOXD4L6Q3SYB3 417 aaPredicted RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 FOXD4L3Q6VB84 417 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms