RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 DAPK3O43293 454 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 DIAPH1O60610 1272 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 STC2O76061 302 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 NPTXRO95502 500 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 HNRNPLP14866 589 aaKnown RBP eCLIP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 TYRP1P17643 537 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 ZFP36P26651 326 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 KIR2DL3P43628 341 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 CLK3P49761 638 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 KIF11P52732 1056 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 BCAR1P56945 870 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 LONRF2Q1L5Z9 754 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 ERCC6LQ2NKX8 1250 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 TMEM177Q53S58 311 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 TRIM61Q5EBN2 209 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 ZC3H12BQ5HYM0 836 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 METTL24Q5JXM2 366 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 TTC38Q5R3I4 469 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 PRAMEF9Q5VWM5 478 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 IQSEC1Q6DN90 963 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 OTOP1Q7RTM1 612 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 CXorf67Q86X51 503 aaPredicted RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 CKAP2LQ8IYA6 745 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 LCORLQ8N3X6 602 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 SLC43A3Q8NBI5 491 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 NELL1Q92832 810 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 RPGRQ92834 1020 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 MYEOVQ96EZ4 313 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 MAGEB10Q96LZ2 347 aaPredicted RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 GMLQ99445 158 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 PDCD2LQ9BRP1 358 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 KCNH6Q9H252 994 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 SERHL2Q9H4I8 314 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 ZNF768Q9H5H4 540 aaKnown RBP1.72□□□□□ -2.13
SNHG3-203ENST00000447507 SFMBT1Q9UHJ3 866 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 INSL6Q9Y581 213 aa1.72□□□□□ -2.13
SNHG3-203ENST00000447507 CCDC85CA6NKD9 419 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 TMEM200CA6NKL6 621 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 AHRRA9YTQ3 701 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 MAFGO15525 162 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 LPXNO60711 386 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 KRT37O76014 449 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 C1RP00736 705 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 FAM153BP0C7A2 387 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 APOBEC3AP31941 199 aaPredicted RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ZEB1P37275 1124 aaPredicted RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 VPS72Q15906 364 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 MAN2A1Q16706 1144 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ARHGAP44Q17R89 818 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 FAM214AQ32MH5 1076 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 EPHA10Q5JZY3 1008 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ZNF362Q5T0B9 420 aaPredicted RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 PAPD7Q5XG87 772 aaKnown RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 FBXO42Q6P3S6 717 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 CCDC62Q6P9F0 684 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 LRP10Q7Z4F1 713 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 GDF7Q7Z4P5 450 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 BRAPQ7Z569 592 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 NME9Q86XW9 330 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ARHGEF19Q8IW93 802 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 IGSF22Q8N9C0 903 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 GLB1L3Q8NCI6 653 aaPredicted RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 OR52N2Q8NGI0 321 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 SLC7A14Q8TBB6 771 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 COQ10AQ96MF6 247 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 UIMC1Q96RL1 719 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 TUBGCP5Q96RT8 1024 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 DCLRE1CQ96SD1 692 aaKnown RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 CPPED1Q9BRF8 314 aaPredicted RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 KRTAP1-5Q9BYS1 174 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 CPEB1Q9BZB8 566 aaKnown RBP1.71□□□□□ -2.14
SNHG3-203ENST00000447507 WDR11Q9BZH6 1224 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 CCDC113Q9H0I3 377 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 EPC1Q9H2F5 836 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 PRDM13Q9H4Q3 707 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 PCIF1Q9H4Z3 704 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 RSAD1Q9HA92 442 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ACSS2Q9NR19 701 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 TRPM5Q9NZQ8 1165 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 ANKFY1Q9P2R3 1169 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 SYNPO2Q9UMS6 1093 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 COL4A3Q01955 1670 aa1.71□□□□□ -2.14
SNHG3-203ENST00000447507 KDM2BQ8NHM5 1336 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 A0A0A6YYJ9 748 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 TCRBV16S1A1N1A0A5B0 115 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 GAGE12BA1L429 117 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 GAGE12HA6NDE8 117 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 H7C1D1 291 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 RNASET2O00584 256 aaKnown RBP1.7□□□□□ -2.14
SNHG3-203ENST00000447507 HOXA3O43365 443 aaPredicted RBP1.7□□□□□ -2.14
SNHG3-203ENST00000447507 DNAJC6O75061 913 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 STK10O94804 968 aaKnown RBP1.7□□□□□ -2.14
SNHG3-203ENST00000447507 FSBPO95073 299 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 CYP17A1P05093 508 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 HKR1P10072 659 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 ZBTB48P10074 688 aaPredicted RBP1.7□□□□□ -2.14
SNHG3-203ENST00000447507 CXCR5P32302 372 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 SEC24CP53992 1094 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 WNT3AP56704 352 aa1.7□□□□□ -2.14
SNHG3-203ENST00000447507 BLOC1S1P78537 153 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms