RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 DMP1Q13316 513 aaPredicted RBP18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 OSGEPQ9NPF4 335 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 KMT5AQ9NQR1 393 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 DOCK5Q9H7D0 1870 aa18.27■□□□□ 0.52
LAPTM4B-201ENST00000445593 POTEB2H3BUK9 544 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 PAFAH1B1P43034 410 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 PRKCEQ02156 737 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 NIPA1Q7RTP0 329 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 XXYLT1Q8NBI6 393 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 SLC20A1Q8WUM9 679 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 TMEM143Q96AN5 459 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 DMAC2Q9NW81 257 aa18.27■□□□□ 0.51
LAPTM4B-201ENST00000445593 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 ACTR2P61160 394 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 C4orf19Q8IY42 314 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 PPM1KQ8N3J5 372 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 LNX1Q8TBB1 728 aaPredicted RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 ZNF668Q96K58 619 aaPredicted RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 RNF181Q9P0P0 153 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 RAB21Q9UL25 225 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 RBBP6Q7Z6E9 1792 aaKnown RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 HARSP12081 509 aaKnown RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 KCNA2P16389 499 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 SOX5P35711 763 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 CASP8Q14790 479 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 APEX2Q9UBZ4 518 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 DBR1Q9UK59 544 aaKnown RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 HNRNPDLO14979 420 aaKnown RBP18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 KLHL7Q8IXQ5 586 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 POMGNT1Q8WZA1 660 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 TMEM206Q9H813 350 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 SLC9A2Q9UBY0 812 aa18.26■□□□□ 0.51
LAPTM4B-201ENST00000445593 ADGRA3Q8IWK6 1321 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 TCP1P17987 556 aaKnown RBP18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 MUTP22033 750 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 JAM2P57087 298 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 AFG3L2Q9Y4W6 797 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 ADSSP30520 456 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 INPP4AQ96PE3 977 aaPredicted RBP18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 FAM53CQ9NYF3 392 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 L1RE1Q9UN81 338 aa18.25■□□□□ 0.51
LAPTM4B-201ENST00000445593 H2AFZP0C0S5 128 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 LMNB1P20700 586 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 CNGA1P29973 690 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SMTNP53814 917 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 GALCP54803 685 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 H2AFVQ71UI9 128 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 HDXQ7Z353 690 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 ADAT2Q7Z6V5 191 aaKnown RBP18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 DAAM2Q86T65 1068 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 GOLGA5Q8TBA6 731 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 RIN2Q8WYP3 895 aaPredicted RBP18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 PI4K2AQ9BTU6 479 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 MKNK1Q9BUB5 465 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 TBX20Q9UMR3 447 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 COL11A1P12107 1806 aaPredicted RBP18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SSC5DA1L4H1 1573 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 TMEM110-MUSTN1A8MSY1 372 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 IRF6O14896 467 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 PGK2P07205 417 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SFNP31947 248 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 MXI1P50539 228 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SNRNP35Q16560 246 aaKnown RBP18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 SULF1Q8IWU6 871 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 GPC2Q8N158 579 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.24■□□□□ 0.515e-8■■□□□ 12.6
LAPTM4B-201ENST00000445593 STRA6Q9BX79 667 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 C19orf81C9J6K1 198 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 CEP104O60308 925 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 MARK3P27448 753 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 TXLNBQ8N3L3 684 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 TMEM161BQ8NDZ6 487 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 TAF4BQ92750 862 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 AP1M1Q9BXS5 423 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 HOXC10Q9NYD6 342 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 CSADQ9Y600 493 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
LAPTM4B-201ENST00000445593 FERP16591 822 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 NAA35Q5VZE5 725 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 INTS8Q75QN2 995 aaKnown RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 ATP6V0A1Q93050 837 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 KRT12Q99456 494 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 STK33Q9BYT3 514 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 FHDC1Q9C0D6 1143 aaPredicted RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 GPR88Q9GZN0 384 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 PFASO15067 1338 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 ATMINO43313 823 aaPredicted RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 TNFAIP3P21580 790 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms