RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 ZNF410Q86VK4 478 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 ZNF280BQ86YH2 543 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 SLC22A17Q8WUG5 538 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 TMEM169Q96HH4 297 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 IGSF21Q96ID5 467 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 NLRP4Q96MN2 994 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 MRPL9Q9BYD2 267 aaKnown RBP15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 C22orf23Q9BZE7 217 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 MINDY3Q9H8M7 445 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 TSHZ2Q9NRE2 1034 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 FAM105AQ9NUU6 356 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 DDX25Q9UHL0 483 aaKnown RBP15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 VAV3Q9UKW4 847 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 PIN4Q9Y237 131 aaKnown RBP15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 INPP5FQ9Y2H2 1132 aa15.91■□□□□ 0.14
SMARCAL1-210ENST00000445153 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 ZNF623O75123 536 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 DDHD2O94830 711 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 BRD1O95696 1058 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 SFPQP23246 707 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 SLC11A1P49279 550 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 DNM2P50570 870 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 PTPN5P54829 565 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 ITIH3Q06033 890 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 NONOQ15233 471 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 TPRNQ4KMQ1 711 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 RARS2Q5T160 578 aaKnown RBP15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 AGMOQ6ZNB7 445 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 CATSPER4Q7RTX7 472 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 DDX53Q86TM3 631 aaKnown RBP15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 KREMEN2Q8NCW0 462 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 KCNMB3Q9NPA1 279 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 CYP26B1Q9NR63 512 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 FAM86C1Q9NVL1 165 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 MYO10Q9HD67 2058 aa15.9■□□□□ 0.14
SMARCAL1-210ENST00000445153 CPLX1O14810 134 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 ZBTB39O15060 712 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 CTSAP10619 480 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 HOXA11P31270 313 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 PPP2R5CQ13362 524 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 LETM2Q2VYF4 491 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 UBXN11Q5T124 520 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 CES5AQ6NT32 575 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 ZBTB33Q86T24 672 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 HAS1Q92839 578 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 TMEM143Q96AN5 459 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 RIPOR3Q96MK2 946 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 INO80BQ9C086 356 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 GBP3Q9H0R5 595 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 CYP46A1Q9Y6A2 500 aa15.89■□□□□ 0.13
SMARCAL1-210ENST00000445153 ASGR2P07307 311 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 QARSP47897 775 aaKnown RBP15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 POLGP54098 1239 aaPredicted RBP15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 SCRN1Q12765 414 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 EARS2Q5JPH6 523 aaKnown RBP15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 GLB1LQ6UWU2 654 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 KRT25Q7Z3Z0 450 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 MRPL10Q7Z7H8 261 aaKnown RBP15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 TM6SF1Q9BZW5 370 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 AGPAT5Q9NUQ2 364 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 RGL1Q9NZL6 768 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 NR2E1Q9Y466 385 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 PCDHB2Q9Y5E7 798 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 COL4A3BPQ9Y5P4 624 aa15.88■□□□□ 0.13
SMARCAL1-210ENST00000445153 LILRB3O75022 631 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 SKIP12755 728 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 PTPN14Q15678 1187 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 GALNT17Q6IS24 598 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 CEP170P1Q96L14 293 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 NECTIN4Q96NY8 510 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 KLHL5Q96PQ7 755 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 PRRX2Q99811 253 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 DHX33Q9H6R0 707 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 LIMD1Q9UGP4 676 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 SORCS3Q9UPU3 1222 aa15.87■□□□□ 0.13
SMARCAL1-210ENST00000445153 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 H0Y858 1186 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 EPB41L2O43491 1005 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 MTHFRP42898 656 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 RAB27AP51159 221 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 RNASELQ05823 741 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 LAMTOR4Q0VGL1 99 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 ATAT1Q5SQI0 421 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 PPP4R3AQ6IN85 833 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 KIAA1841Q6NSI8 718 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 TMC5Q6UXY8 1006 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 SMG8Q8ND04 991 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 FAM20AQ96MK3 541 aa15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 SLKQ9H2G2 1235 aaPredicted RBP15.86■□□□□ 0.13
SMARCAL1-210ENST00000445153 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms