RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 HRH3Q9Y5N1 445 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 ZSCAN5CA6NGD5 496 aaPredicted RBP4.35□□□□□ -1.71
UBR3-206ENST00000444475 TRAF5O00463 557 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 KPNA5O15131 536 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 DAPK3O43293 454 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 PLA2G6O60733 806 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 SMPD2O60906 423 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 CCNYL3P0C7X3 344 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 PABPC1P11940 636 aaKnown RBP4.35□□□□□ -1.71
UBR3-206ENST00000444475 HNMTP50135 292 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 PEX5P50542 639 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 FXR2P51116 673 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBR3-206ENST00000444475 BEX3Q00994 111 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 ZNF543Q08ER8 600 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 SNX17Q15036 470 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 RNF220Q5VTB9 566 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 DARS2Q6PI48 645 aaKnown RBP4.35□□□□□ -1.71
UBR3-206ENST00000444475 FBXO15Q8NCQ5 510 aaPredicted RBP4.35□□□□□ -1.71
UBR3-206ENST00000444475 RMDN2Q96LZ7 410 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 GAS2L1Q99501 681 aaPredicted RBP4.35□□□□□ -1.71
UBR3-206ENST00000444475 COLEC11Q9BWP8 271 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 CAPS2Q9BXY5 557 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 SPTLC3Q9NUV7 552 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 C5AR2Q9P296 337 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 CLDN16Q9Y5I7 305 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 SESN1Q9Y6P5 492 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 MROH5Q6ZUA9 1318 aa4.35□□□□□ -1.71
UBR3-206ENST00000444475 TXNL1O43396 289 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PRPSAP2O60256 369 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 GADD45BO75293 160 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 CHGBP05060 677 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 TMEM11P17152 192 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SERPINF1P36955 418 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SMTNP53814 917 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 NR5A1Q13285 461 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SURF1Q15526 300 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PFKFB4Q16877 469 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ZNF674Q2M3X9 581 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ALG11Q2TAA5 492 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 KIF4BQ2VIQ3 1234 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SNX30Q5VWJ9 437 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SLC5A11Q8WWX8 675 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 JADE3Q92613 823 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PPP1R14AQ96A00 147 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 CABS1Q96KC9 395 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 CDC6Q99741 560 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 C1QTNF2Q9BXJ5 285 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 OXCT2Q9BYC2 517 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 NACA2Q9H009 215 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 TM9SF3Q9HD45 589 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 GLRX2Q9NS18 164 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ZNHIT6Q9NWK9 470 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 SEPT10Q9P0V9 454 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 USP36Q9P275 1121 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 TBC1D14Q9P2M4 693 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 UBA2Q9UBT2 640 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 SERTAD1Q9UHV2 236 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ITGB1BP2Q9UKP3 347 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 JRKLQ9Y4A0 524 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 ZNF335Q9H4Z2 1342 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 KDRP35968 1356 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 TTLL8A6PVC2 850 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 CBX4O00257 560 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 THP07101 528 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 GNAT2P19087 354 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ATP5OP48047 213 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 AFF3P51826 1226 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 PPP5CP53041 499 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 UBE3CQ15386 1083 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 CLPPQ16740 277 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 PROSER3Q2NL68 480 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 ZACNQ401N2 412 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 DNTTIP2Q5QJE6 756 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 HAUS3Q68CZ6 603 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 INTS3Q68E01 1043 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 NPNTQ6UXI9 565 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 UNC5AQ6ZN44 842 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PIWIL3Q7Z3Z3 882 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 MOGAT3Q86VF5 341 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PACS2Q86VP3 889 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.34□□□□□ -1.71
UBR3-206ENST00000444475 CRACR2BQ8N4Y2 399 aaPredicted RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 ANKRD53Q8N9V6 530 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 DENND6BQ8NEG7 585 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 MRPL46Q9H2W6 279 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 PHAXQ9H814 394 aaKnown RBP4.34□□□□□ -1.71
UBR3-206ENST00000444475 FAM153AQ9UHL3 310 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 SLC12A7Q9Y666 1083 aa4.34□□□□□ -1.71
UBR3-206ENST00000444475 A0A1W2PP55 124 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 H0YC42 278 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 ACKR2O00590 384 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 EFCAB14O75071 495 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 UBXN7O94888 489 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 MYF5P13349 255 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SULT1E1P49888 294 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 SCNN1BP51168 640 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 RAD23AP54725 363 aa4.34□□□□□ -1.72
UBR3-206ENST00000444475 FOXO4P98177 505 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms