RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 H3BNC9 293 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 TSPAN1O60635 241 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 EYA4O95677 639 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 BMPR1AP36894 532 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 CCDC85BQ15834 202 aaPredicted RBP24.23■■□□□ 1.47
TRAF4-205ENST00000444415 TMEM119Q4V9L6 283 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 LRRC55Q6ZSA7 311 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 DAW1Q8N136 415 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 CASD1Q96PB1 797 aa24.23■■□□□ 1.47
TRAF4-205ENST00000444415 TBKBP1A7MCY6 615 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 CTNNB1P35222 781 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 PKP1Q13835 747 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 CDCA2Q69YH5 1023 aaPredicted RBP24.22■■□□□ 1.47
TRAF4-205ENST00000444415 PPM1EQ8WY54 764 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 USP28Q96RU2 1077 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 PLIN2Q99541 437 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 RUSC1Q9BVN2 902 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 DACT1Q9NYF0 836 aa24.22■■□□□ 1.47
TRAF4-205ENST00000444415 MYH11P35749 1972 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 BMP15O95972 392 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 EDN1P05305 212 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 TWF2Q6IBS0 349 aaKnown RBP24.21■■□□□ 1.47
TRAF4-205ENST00000444415 LPPQ93052 612 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 CWH43Q9H720 699 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 FAM105AQ9NUU6 356 aa24.21■■□□□ 1.47
TRAF4-205ENST00000444415 INO80B-WBP1J3KQ70 363 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 B4GALT5O43286 388 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 MAPK7Q13164 816 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 GPM6BQ13491 265 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 TFDP1Q14186 410 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 RINT1Q6NUQ1 792 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 USP49Q70CQ1 688 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 MICALL1Q8N3F8 863 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 SPRYD3Q8NCJ5 442 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 AK8Q96MA6 479 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 FBXO2Q9UK22 296 aaPredicted RBP24.2■■□□□ 1.47
TRAF4-205ENST00000444415 DNM3Q9UQ16 869 aa24.2■■□□□ 1.47
TRAF4-205ENST00000444415 TTLL13PA6NNM8 815 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 GRM6O15303 877 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 EOMESO95936 686 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 MARCKSP29966 332 aaPredicted RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 CAMK1Q14012 370 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 ZRSR1Q15695 479 aaKnown RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 LONRF3Q496Y0 759 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 C1orf186Q6ZWK4 172 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 CABP7Q86V35 215 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 RNF169Q8NCN4 708 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 CPB2Q96IY4 423 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 KIFC3Q9BVG8 833 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 TMEM117Q9H0C3 514 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 ZSCAN16Q9H4T2 348 aaPredicted RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 TYW1Q9NV66 732 aaKnown RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 LMCD1Q9NZU5 365 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 LRRIQ4A6NIV6 560 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 GTPBP6O43824 516 aaPredicted RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 ZNF623O75123 536 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 ARF4P18085 180 aaPredicted RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 SLC12A3P55017 1021 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 CEBPZQ03701 1054 aaKnown RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 HELQQ8TDG4 1101 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 EIF2AQ9BY44 585 aaKnown RBP24.19■■□□□ 1.46
TRAF4-205ENST00000444415 CCDC113Q9H0I3 377 aa24.19■■□□□ 1.46
TRAF4-205ENST00000444415 RB1P06400 928 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 DNAJB1P25685 340 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 LONP1P36776 959 aaKnown RBP24.18■■□□□ 1.46
TRAF4-205ENST00000444415 SMG8Q8ND04 991 aaKnown RBP24.18■■□□□ 1.46
TRAF4-205ENST00000444415 CLIC6Q96NY7 704 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 CSRNP2Q9H175 543 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 FZD8Q9H461 694 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 BLOC1S4Q9NUP1 217 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 RWDD3Q9Y3V2 267 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 PCDHB2Q9Y5E7 798 aa24.18■■□□□ 1.46
TRAF4-205ENST00000444415 ERLIN2O94905 339 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 ITGB1P05556 798 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 NAMPTP43490 491 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 AFF1P51825 1210 aaKnown RBP24.17■■□□□ 1.46
TRAF4-205ENST00000444415 PCBP1Q15365 356 aaKnown RBP eCLIP24.17■■□□□ 1.464e-7■■■■■ 32.7
TRAF4-205ENST00000444415 SPECC1Q5M775 1068 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 PPP4R3CPQ6ZMV5 832 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 AGMOQ6ZNB7 445 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 MRPL10Q7Z7H8 261 aaKnown RBP24.17■■□□□ 1.46
TRAF4-205ENST00000444415 SYT2Q8N9I0 419 aaPredicted RBP24.17■■□□□ 1.46
TRAF4-205ENST00000444415 PLVAPQ9BX97 442 aa24.17■■□□□ 1.46
TRAF4-205ENST00000444415 RNF216Q9NWF9 866 aaPredicted RBP24.17■■□□□ 1.46
TRAF4-205ENST00000444415 MORC2Q9Y6X9 1032 aaPredicted RBP24.17■■□□□ 1.46
TRAF4-205ENST00000444415 HIP1RO75146 1068 aa24.16■■□□□ 1.46
TRAF4-205ENST00000444415 NASPP49321 788 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 KARSQ15046 597 aaKnown RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 FOXD4L5Q5VV16 416 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 CDR2LQ86X02 465 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.16■■□□□ 1.465e-7■■■■■ 32.1
TRAF4-205ENST00000444415 KLHL23Q8NBE8 558 aa24.16■■□□□ 1.46
TRAF4-205ENST00000444415 FOXD4L4Q8WXT5 416 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 P2RX5Q93086 422 aa24.16■■□□□ 1.46
TRAF4-205ENST00000444415 MRPL38Q96DV4 380 aaKnown RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 EPSTI1Q96J88 318 aa24.16■■□□□ 1.46
TRAF4-205ENST00000444415 C11orf84Q9BUA3 381 aaPredicted RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 NT5C3AQ9H0P0 336 aa24.16■■□□□ 1.46
TRAF4-205ENST00000444415 ALG13Q9NP73 1137 aaKnown RBP24.16■■□□□ 1.46
TRAF4-205ENST00000444415 PLAGL2Q9UPG8 496 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms