RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 VN1R3Q9BXE9 311 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ZBP1Q9H171 429 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 TBC1D13Q9NVG8 400 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 PIN4Q9Y237 131 aaKnown RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 EML1O00423 815 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 SLC37A4O43826 429 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 MAFO75444 373 aaPredicted RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 CXCL14O95715 111 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 ASGR2P07307 311 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 EPCAMP16422 314 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 CA8P35219 290 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 AFF1P51825 1210 aaKnown RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 ITIH3Q06033 890 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 RARS2Q5T160 578 aaKnown RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 CES5AQ6NT32 575 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 RHPN2Q8IUC4 686 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 TMEM169Q96HH4 297 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 IGSF21Q96ID5 467 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 MBOAT7Q96N66 472 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 NECTIN4Q96NY8 510 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 PRRX2Q99811 253 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 NRDE2Q9H7Z3 1164 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 IFT122Q9HBG6 1241 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 CHST12Q9NRB3 414 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 SUCLA2Q9P2R7 463 aaPredicted RBP9.37□□□□□ -0.91
TOP3B-209ENST00000442653 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 NR2E1Q9Y466 385 aa9.37□□□□□ -0.91
TOP3B-209ENST00000442653 FAM186AA6NE01 2351 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 H0Y858 1186 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 ZNF623O75123 536 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 OFD1O75665 1012 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 GALTP07902 379 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 CTSAP10619 480 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 SLC11A1P49279 550 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 DNM2P50570 870 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
TOP3B-209ENST00000442653 ZNF410Q86VK4 478 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 ZNF280BQ86YH2 543 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 BLIDQ8IZY5 108 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
TOP3B-209ENST00000442653 SLC22A17Q8WUG5 538 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 NLRP4Q96MN2 994 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 GBP3Q9H0R5 595 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 MINDY3Q9H8M7 445 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 AGPAT5Q9NUQ2 364 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 WRAP73Q9P2S5 460 aaPredicted RBP9.36□□□□□ -0.91
TOP3B-209ENST00000442653 VAV3Q9UKW4 847 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 IRAK3Q9Y616 596 aa9.36□□□□□ -0.91
TOP3B-209ENST00000442653 DTNBO60941 627 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 DDHD2O94830 711 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 PSMA5P28066 241 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 MTHFRP42898 656 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 PLXNA3P51805 1871 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 POLGP54098 1239 aaPredicted RBP9.35□□□□□ -0.91
TOP3B-209ENST00000442653 NPEPPSP55786 919 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 PSMC5P62195 406 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 RNASELQ05823 741 aaKnown RBP9.35□□□□□ -0.91
TOP3B-209ENST00000442653 SSRP1Q08945 709 aaKnown RBP9.35□□□□□ -0.91
TOP3B-209ENST00000442653 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 INF2Q27J81 1249 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 KIAA1841Q6NSI8 718 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 MOXD1Q6UVY6 613 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 TMC5Q6UXY8 1006 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 DENND4AQ7Z401 1863 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 UBALD2Q8IYN6 164 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 TMEM105Q8N8V8 129 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 TDRD5Q8NAT2 981 aaKnown RBP9.35□□□□□ -0.91
TOP3B-209ENST00000442653 DAGLBQ8NCG7 672 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 CYP26B1Q9NR63 512 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 DZANK1Q9NVP4 752 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
TOP3B-209ENST00000442653 KCNJ14Q9UNX9 436 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms