RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TACC1O75410 805 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 URI1O94763 535 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 SLU7O95391 586 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 HOXC6P09630 235 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 GTF2H1P32780 548 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 HOXD13P35453 343 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 MAGEA1P43355 309 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 SURF1Q15526 300 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 TAF1CQ15572 869 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 TMEM132AQ24JP5 1023 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ZNF792Q3KQV3 632 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 CCDC122Q5T0U0 273 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ZNF662Q6ZS27 426 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 APBB1IPQ7Z5R6 666 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 FBXO16Q8IX29 292 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 TMEM161BQ8NDZ6 487 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 PORCNQ9H237 461 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 TMEM134Q9H6X4 195 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ZFYVE28Q9HCC9 887 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 LZTFL1Q9NQ48 299 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 AGPAT5Q9NUQ2 364 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 ZNF233A6NK53 670 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 TMOD1P28289 359 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 CASP4P49662 377 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 MXI1P50539 228 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 VAV2P52735 878 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 MAPK8IP2Q13387 824 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 KLHDC7AQ5VTJ3 777 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 GPD1LQ8N335 351 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 KCNN1Q92952 543 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ERO1AQ96HE7 468 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 FNBP1Q96RU3 617 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 GPR20Q99678 358 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 INTS2Q9H0H0 1204 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 ERAP1Q9NZ08 941 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 TULP1O00294 542 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 RIOK3O14730 519 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 MAFO75444 373 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 STBD1O95210 358 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 EIF4A3P38919 411 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 KLK7P49862 253 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 KIF11P52732 1056 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 LY6KQ17RY6 165 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ZNF569Q5MCW4 686 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 RGMBQ6NW40 437 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 GPR142Q7Z601 462 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 ACRBPQ8NEB7 543 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 NAPGQ99747 312 aaPredicted RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 IFIH1Q9BYX4 1025 aaKnown RBP6.56□□□□□ -1.36
VPS50-205ENST00000441602 ABHD16BQ9H3Z7 469 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 PCIF1Q9H4Z3 704 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 XPNPEP1Q9NQW7 623 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 COL1A2P08123 1366 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 PMM2O15305 246 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 ARL2P36404 184 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SP2Q02086 613 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 KCNMA1Q12791 1236 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 MTF1Q14872 753 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 MTERF4Q7Z6M4 381 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 BAP1Q92560 729 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CHP1Q99653 195 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-205ENST00000441602 MRPL4Q9BYD3 311 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 GANQ9H2C0 597 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 PDLIM7Q9NR12 457 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 AIPL1Q9NZN9 384 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 ARHGAP28Q9P2N2 729 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 RBM47A0AV96 593 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 EXTL3O43909 919 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 PEX10O60683 326 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 UCHL3P15374 230 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 PON1P27169 355 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CNGA1P29973 690 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 AP3M2P53677 418 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 KCNA1Q09470 495 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 GRB14Q14449 540 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CCDC62Q6P9F0 684 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 ZPBP2Q6X784 338 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 RDH13Q8NBN7 331 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 TMEM143Q96AN5 459 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 ZHX1Q9UKY1 873 aaPredicted RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 GUCA1BQ9UMX6 200 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SOCS7O14512 581 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 PIGRP01833 764 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-205ENST00000441602 RGS2P41220 211 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 PHKA2P46019 1235 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CKAP4Q07065 602 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms