RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 TCERG1LQ5VWI1 586 aa20.9■□□□□ 0.94
SNX17-203ENST00000440760 ERGIC2Q96RQ1 377 aa20.9■□□□□ 0.94
SNX17-203ENST00000440760 HSPBP1Q9NZL4 362 aa20.9■□□□□ 0.94
SNX17-203ENST00000440760 KAT6AQ92794 2004 aa20.89■□□□□ 0.94
SNX17-203ENST00000440760 A6NJR5 290 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 AKR1B15C9JRZ8 316 aaPredicted RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 HNRNPDLO14979 420 aaKnown RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 EDN1P05305 212 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 ADSSP30520 456 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 PSMC2P35998 433 aaKnown RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 PPP2R5AQ15172 486 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 EFCAB12Q6NXP0 572 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 REM2Q8IYK8 340 aaPredicted RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 CD99L2Q8TCZ2 262 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 PSPC1Q8WXF1 523 aaKnown RBP20.89■□□□□ 0.93
SNX17-203ENST00000440760 BICD1Q96G01 975 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 BORCS6Q96GS4 357 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 FAM184BQ9ULE4 1060 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 EXOC7Q9UPT5 735 aa20.89■□□□□ 0.93
SNX17-203ENST00000440760 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNX17-203ENST00000440760 CYBAP13498 195 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 LAMTOR4Q0VGL1 99 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 KCNH2Q12809 1159 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 ZNF484Q5JVG2 852 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 IER5Q5VY09 327 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 SLC9A9Q8IVB4 645 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 SAAL1Q96ER3 474 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
SNX17-203ENST00000440760 SIK3Q9Y2K2 1263 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 FRMD4BQ9Y2L6 1034 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 THSD7BQ9C0I4 1608 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 GOLGA8IPA6NC78 632 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 GOLGA8JA6NMD2 632 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 EPHB6O15197 1021 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 ELNP15502 786 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 CNGA1P29973 690 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 PPFIA1Q13136 1202 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 RHPN2Q8IUC4 686 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 TCP11Q8WWU5 503 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 PPP1R16BQ96T49 567 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 CRACR2AQ9BSW2 395 aa20.88■□□□□ 0.93
SNX17-203ENST00000440760 BRCA2P51587 3418 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 TTC26A0AVF1 554 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 MYADML2A6NDP7 307 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 AKR1A1P14550 325 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 KLRC1P26715 233 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 KIF22Q14807 665 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 MFSD14CQ5VZR4 134 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 TMEM139Q8IV31 216 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 C12orf56Q8IXR9 622 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 RNF149Q8NC42 400 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 KIAA1524Q8TCG1 905 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 SLC35C1Q96A29 364 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 NLRP4Q96MN2 994 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 MKNK1Q9BUB5 465 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 TTYH3Q9C0H2 523 aa20.87■□□□□ 0.93
SNX17-203ENST00000440760 FAM207AQ9NSI2 230 aaPredicted RBP20.87■□□□□ 0.93
SNX17-203ENST00000440760 GAS2O43903 313 aaKnown RBP20.86■□□□□ 0.93
SNX17-203ENST00000440760 TRIM49P0CI25 452 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 TRIM49CP0CI26 452 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 TRIM21P19474 475 aaKnown RBP20.86■□□□□ 0.93
SNX17-203ENST00000440760 KCNMA1Q12791 1236 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 GRIK4Q16099 956 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 KAT2BQ92831 832 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 METTL14Q9HCE5 456 aaKnown RBP20.86■□□□□ 0.93
SNX17-203ENST00000440760 H0YCG3 227 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 ADCY3O60266 1144 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 F2P00734 622 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 MYL3P08590 195 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 MAP2K2P36507 400 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 APBA1Q02410 837 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 STRN3Q13033 797 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 TRIM14Q14142 442 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 XXYLT1Q8NBI6 393 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 JPH2Q9BR39 696 aaPredicted RBP20.86■□□□□ 0.93
SNX17-203ENST00000440760 CFHR5Q9BXR6 569 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 AP5M1Q9H0R1 490 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 MMRN2Q9H8L6 949 aa20.86■□□□□ 0.93
SNX17-203ENST00000440760 CGNQ9P2M7 1197 aaKnown RBP20.86■□□□□ 0.93
SNX17-203ENST00000440760 PHLPP2Q6ZVD8 1323 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 TTLL13PA6NNM8 815 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 K7ERI5 159 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 AFPP02771 609 aaKnown RBP20.85■□□□□ 0.93
SNX17-203ENST00000440760 ADRB2P07550 413 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 TPM1P09493 284 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 LIG4P49917 911 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 KIAA0753Q2KHM9 967 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 EXOC8Q8IYI6 725 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 POMGNT1Q8WZA1 660 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 TMX1Q9H3N1 280 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 SETD4Q9NVD3 440 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 COL1A2P08123 1366 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 KRT9P35527 623 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 CPT1AP50416 773 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
SNX17-203ENST00000440760 MYBPC2Q14324 1141 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 MXD4Q14582 209 aaPredicted RBP20.85■□□□□ 0.93
SNX17-203ENST00000440760 MARCH8Q5T0T0 291 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms