RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 MAGEB2O15479 319 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 MED24O75448 989 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 LYPLA2O95372 231 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CHRNA1P02708 482 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ACRP10323 421 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-203ENST00000439936 SELPP16109 830 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RPA1P27694 616 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CDC25AP30304 524 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CEBPZQ03701 1054 aaKnown RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 FPGSQ05932 587 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 PPIGQ13427 754 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-203ENST00000439936 PTPAQ15257 358 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 SHHQ15465 462 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 TMEM266Q2M3C6 531 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 MTERF2Q49AM1 385 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 FAM26DQ5JW98 314 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ARL6IP4Q66PJ3 421 aaKnown RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 EFCAB12Q6NXP0 572 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 ZNF365Q70YC5 407 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 OTUD6AQ7L8S5 288 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RPAINQ86UA6 219 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CATSPER3Q86XQ3 398 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 KIAA0319LQ8IZA0 1049 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 USP28Q96RU2 1077 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 LXNQ9BS40 222 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 POLR3CQ9BUI4 534 aaPredicted RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 FTOQ9C0B1 505 aaKnown RBP eCLIP8.35□□□□□ -1.07
COPS3-203ENST00000439936 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
COPS3-203ENST00000439936 TUFT1Q9NNX1 390 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 IL23AQ9NPF7 189 aa8.35□□□□□ -1.07
COPS3-203ENST00000439936 VWA3AA6NCI4 1184 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 PP2D1A8MPX8 630 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 NBNO60934 754 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 C22orf31O95567 290 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 BRD1O95696 1058 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 BMP15O95972 392 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 F13A1P00488 732 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 FGBP02675 491 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 MARCKSP29966 332 aaPredicted RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 YWHABP31946 246 aaKnown RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 CCT6AP40227 531 aaKnown RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 MCCD1P59942 119 aaPredicted RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 SLC39A14Q15043 492 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 ECM1Q16610 540 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 XKR9Q5GH70 373 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 PLA2G4FQ68DD2 849 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 TAF2Q6P1X5 1199 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 RSPH3Q86UC2 560 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 NME8Q8N427 588 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 NEK9Q8TD19 979 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 PIGOQ8TEQ8 1089 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 CEP170P1Q96L14 293 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.074e-9■■■■■ 32.8
COPS3-203ENST00000439936 ANP32EQ9BTT0 268 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 MMTAG2Q9BU76 263 aaKnown RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 FAM49AQ9H0Q0 323 aaPredicted RBP8.34□□□□□ -1.07
COPS3-203ENST00000439936 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 CYP26B1Q9NR63 512 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 ANKEF1Q9NU02 776 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
COPS3-203ENST00000439936 MYH15Q9Y2K3 1946 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 IGKV6-21A0A0C4DH24 114 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 CAND2O75155 1236 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 MAFO75444 373 aaPredicted RBP8.33□□□□□ -1.08
COPS3-203ENST00000439936 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
COPS3-203ENST00000439936 CTSHP09668 335 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 MUTP22033 750 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 CLCN3P51790 818 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 GRIN1Q05586 938 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 MGAT3Q09327 533 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 TMEM62Q0P6H9 643 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 IER5Q5VY09 327 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 PHTF2Q8N3S3 785 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 TMEM151AQ8N4L1 468 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 LRRC71Q8N4P6 559 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 METTL13Q8N6R0 699 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 LINC01465Q8N7H1 131 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 ERMNQ8TAM6 284 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 CALR3Q96L12 384 aaKnown RBP8.33□□□□□ -1.08
COPS3-203ENST00000439936 ZNF396Q96N95 335 aaPredicted RBP8.33□□□□□ -1.08
COPS3-203ENST00000439936 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
COPS3-203ENST00000439936 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
COPS3-203ENST00000439936 RAB34Q9BZG1 259 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms