RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KRT13P13646 458 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 CACNB3P54284 484 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 NCALDP61601 193 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 FGFR1OP2Q9NVK5 253 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 ADAM22Q9P0K1 906 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 AGAP1Q9UPQ3 857 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 FAM13AO94988 1023 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 CACNA2D1P54289 1103 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 CUL1Q13616 776 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 CFAP157Q5JU67 520 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 TAOK1Q7L7X3 1001 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 CTNNBL1Q8WYA6 563 aaPredicted RBP16.97■□□□□ 0.31
DHFR-201ENST00000439211 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 LARSQ9P2J5 1176 aaKnown RBP16.97■□□□□ 0.31
DHFR-201ENST00000439211 ATXN10Q9UBB4 475 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 STOML1Q9UBI4 398 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 MYH6P13533 1939 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 KDM3AQ9Y4C1 1321 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 A0A087X0T9 212 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 DAPK3O43293 454 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 TMCC1O94876 653 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 FAM228BP0C875 321 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
DHFR-201ENST00000439211 DDX47Q9H0S4 455 aaKnown RBP16.97■□□□□ 0.31
DHFR-201ENST00000439211 CA8P35219 290 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 FIGNQ5HY92 759 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 GDAP1Q8TB36 358 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
DHFR-201ENST00000439211 PCMTD2Q9NV79 361 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 SLC12A6Q9UHW9 1150 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 PCDHGA4Q9Y5G9 962 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 ATP2B4P23634 1241 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
DHFR-201ENST00000439211 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.31
DHFR-201ENST00000439211 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 TCP11X1B4DZS4 312 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 HSPA9P38646 679 aaKnown RBP16.96■□□□□ 0.31
DHFR-201ENST00000439211 ITIH3Q06033 890 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 YIPF2Q9BWQ6 316 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 TLR10Q9BXR5 811 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 TXLNGQ9NUQ3 528 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 TCEAL9Q9UHQ7 104 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
DHFR-201ENST00000439211 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.3
DHFR-201ENST00000439211 ATP6V1C1P21283 382 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 MAGEA10P43363 369 aaPredicted RBP16.95■□□□□ 0.3
DHFR-201ENST00000439211 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 AZI2Q9H6S1 392 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 GDF3Q9NR23 364 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 PKD2L1Q9P0L9 805 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 PEX5P50542 639 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 MAP7D3Q8IWC1 876 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 TPH2Q8IWU9 490 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 MYCT1Q8N699 235 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 DMAP1Q9NPF5 467 aaPredicted RBP16.95■□□□□ 0.3
DHFR-201ENST00000439211 HNRNPRO43390 633 aaKnown RBP16.95■□□□□ 0.3
DHFR-201ENST00000439211 H2AFZP0C0S5 128 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 SLC9A1P19634 815 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 STX2P32856 288 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 TUBP50607 506 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 H2AFVQ71UI9 128 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 CENPKQ9BS16 269 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
DHFR-201ENST00000439211 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
DHFR-201ENST00000439211 GFPT2O94808 682 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 GSTA2P09210 222 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 SLURP2P0DP57 97 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 CALB2P22676 271 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PDIA5Q14554 519 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PROM2Q8N271 834 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 ARHGAP18Q8N392 663 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PIGOQ8TEQ8 1089 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 ANKRD27Q96NW4 1050 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PAX3P23760 479 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 CYP2J2P51589 502 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 HS2ST1Q7LGA3 356 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PRDM16Q9HAZ2 1276 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PNMA3Q9UL41 463 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.94■□□□□ 0.3
DHFR-201ENST00000439211 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
DHFR-201ENST00000439211 ETS2P15036 469 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 RASSF2P50749 326 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 PPP4CP60510 307 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 COG7P83436 770 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 P3H1Q32P28 736 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 ERMARDQ5T6L9 678 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms