RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 VWA5AO00534 786 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 KRT39Q6A163 491 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 RIN2Q8WYP3 895 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 GPRASP2Q96D09 838 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 KRT12Q99456 494 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 TIPINQ9BVW5 301 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 PFASO15067 1338 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 ASB14A6NK59 587 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 UCHL3P15374 230 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 HOXD10P28358 340 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 ERVK-24P63145 666 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 GUCY2DQ02846 1103 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 PHLDB2Q86SQ0 1253 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 HSPBP1Q9NZL4 362 aa12.47□□□□□ -0.41
TRAPPC9-202ENST00000438773 POLR2BP30876 1174 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 CLUL1Q15846 466 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 TACO1Q9BSH4 297 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 DNAJC18Q9H819 358 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 RPF1Q9H9Y2 349 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 IKBKGQ9Y6K9 419 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 EML1O00423 815 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLC16A3O15427 465 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 PALMO75781 387 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLC25A27O95847 323 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SNX16P57768 344 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SLC20A2Q08357 652 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 ZNF394Q53GI3 561 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 RNF149Q8NC42 400 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 KCNK9Q9NPC2 374 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 AGO2Q9UKV8 859 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
TRAPPC9-202ENST00000438773 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 PTPRAP18433 802 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 MAPK4P31152 587 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 ACTR2P61160 394 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC7A5Q01650 507 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 C2orf54Q08AI8 447 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF568Q3ZCX4 644 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 OTOP1Q7RTM1 612 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 DPH5Q9H2P9 285 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 HESX1Q9UBX0 185 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 NUP98P52948 1817 aa12.46□□□□□ -0.42
TRAPPC9-202ENST00000438773 E7EVH7 732 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 TBC1D12O60347 775 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 BUB1BO60566 1050 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 CA8P35219 290 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 FMO5P49326 533 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 BFSP1Q12934 665 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 NPY5RQ15761 445 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 LMBRD2Q68DH5 695 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF746Q6NUN9 644 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 GAS8O95995 478 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 VPS41P49754 854 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 TMEM119Q4V9L6 283 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PCNX4Q63HM2 1172 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 SHISA4Q96DD7 197 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 KIFC3Q9BVG8 833 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 RAB17Q9H0T7 212 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 NID2Q14112 1375 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 DSG3P32926 999 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 SURF1Q15526 300 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 CATSPER4Q7RTX7 472 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 RBAKQ9NYW8 714 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 BAIAP2L1Q9UHR4 511 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 IFNB1P01574 187 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 ATF7P17544 494 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPP2R5EQ16537 467 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 CCL15Q16663 113 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 GPD1LQ8N335 351 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 C4orf32Q8N8J7 132 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 AGPAT3Q9NRZ7 376 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 PARP2Q9UGN5 583 aa12.45□□□□□ -0.42
TRAPPC9-202ENST00000438773 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 TLR3O15455 904 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms