RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CCDC169A6NNP5 214 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 TBCAO75347 108 aaKnown RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 AMHP03971 560 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 IBSPP21815 317 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 NPTX2P47972 431 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 DMP1Q13316 513 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 COL4A6Q14031 1691 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 GIT2Q14161 759 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 DSC3Q14574 896 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 RTN4RL1Q86UN2 441 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 DDX12PQ92771 950 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 ADAM2Q99965 735 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 NFKBIZQ9BYH8 718 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 TSPYL2Q9H2G4 693 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-202ENST00000438552 CUEDC2Q9H467 287 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 HPSEQ9Y251 543 aa17.85■□□□□ 0.45
SNRPB-202ENST00000438552 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
SNRPB-202ENST00000438552 ENPP3O14638 875 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 TSPAN1O60635 241 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 ERLIN2O94905 339 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 FAM13AO94988 1023 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 PLS3P13797 630 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 LIG1P18858 919 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 NDUFA8P51970 172 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 AMHR2Q16671 573 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 FAM117BQ6P1L5 589 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 CCDC113Q9H0I3 377 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 C2orf40Q9H1Z8 148 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 TNMDQ9H2S6 317 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 ZHX3Q9H4I2 956 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 AGPAT5Q9NUQ2 364 aa17.84■□□□□ 0.45
SNRPB-202ENST00000438552 PHLPP2Q6ZVD8 1323 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 B4GALT5O43286 388 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 ACTN4O43707 911 aaKnown RBP17.83■□□□□ 0.44
SNRPB-202ENST00000438552 EDN1P05305 212 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 ZNF131P52739 623 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 RABGGTBP53611 331 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 HERC6Q8IVU3 1022 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 GRAMD1CQ8IYS0 662 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 DNAJC19Q96DA6 116 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 C17orf75Q9HAS0 396 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 KMT5AQ9NQR1 393 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 KBTBD4Q9NVX7 518 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.44
SNRPB-202ENST00000438552 KIAA1671Q9BY89 1806 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-202ENST00000438552 FAM237AA0A1B0GTK4 181 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 SLC16A4O15374 487 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 UPP2O95045 317 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 PRKCBP05771 671 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-202ENST00000438552 SYKP43405 635 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 CEP57L1Q8IYX8 460 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 PYM1Q9BRP8 204 aaKnown RBP17.82■□□□□ 0.44
SNRPB-202ENST00000438552 MAGEF1Q9HAY2 307 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 PARVGQ9HBI0 331 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 LARSQ9P2J5 1176 aaKnown RBP17.82■□□□□ 0.44
SNRPB-202ENST00000438552 ARHGAP28Q9P2N2 729 aa17.82■□□□□ 0.44
SNRPB-202ENST00000438552 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-202ENST00000438552 CNTNAP2Q9UHC6 1331 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 TTLL13PA6NNM8 815 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 C9IYK1 514 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 SLFN14P0C7P3 912 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 IDEP14735 1019 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 ARF4P18085 180 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 CASP1P29466 404 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 HOXA11P31270 313 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 PBX2P40425 430 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 AFMP43652 599 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 SARSP49591 514 aaKnown RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 EFNA5P52803 228 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 MAPK6Q16659 721 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 CSPP1Q1MSJ5 1256 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 TWF2Q6IBS0 349 aaKnown RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 SFR1Q86XK3 245 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 PHOSPHO2Q8TCD6 241 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 TRIM9Q9C026 710 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 FZD8Q9H461 694 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 C1orf112Q9NSG2 853 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 PRMT7Q9NVM4 692 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-202ENST00000438552 USP20Q9Y2K6 914 aa17.81■□□□□ 0.44
SNRPB-202ENST00000438552 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 K7ENM7 598 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 GADD45BO75293 160 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-202ENST00000438552 GJB5O95377 273 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 MYOGP15173 224 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms