RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 GTF2F1P35269 517 aaKnown RBP eCLIP20.35■□□□□ 0.85
HMGN1-207ENST00000436324 IRS1P35568 1242 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 PBX3P40426 434 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 FXR2P51116 673 aaKnown RBP eCLIP20.35■□□□□ 0.85
HMGN1-207ENST00000436324 TFDP1Q14186 410 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 LRRC43Q8N309 656 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 CLDND1Q9NY35 253 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 DBR1Q9UK59 544 aaKnown RBP20.35■□□□□ 0.85
HMGN1-207ENST00000436324 PCDHGC5Q9Y5F6 944 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 FNDC1Q4ZHG4 1894 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-207ENST00000436324 UNC80Q8N2C7 3258 aa20.35■□□□□ 0.85
HMGN1-207ENST00000436324 ARHGEF35A5YM69 484 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 MEIS3P2A8K0S8 358 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 H3BQ06 376 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-207ENST00000436324 INO80B-WBP1J3KQ70 363 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 ERLIN2O94905 339 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 SKIP12755 728 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 PTENP60484 403 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 HYAL1Q12794 435 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 CAPSQ13938 189 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 ECM1Q16610 540 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 LARP1BQ659C4 914 aaKnown RBP20.34■□□□□ 0.85
HMGN1-207ENST00000436324 MICAL1Q8TDZ2 1067 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.34■□□□□ 0.85
HMGN1-207ENST00000436324 INPP5FQ9Y2H2 1132 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 PCDHB2Q9Y5E7 798 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 KIAA1671Q9BY89 1806 aa20.34■□□□□ 0.85
HMGN1-207ENST00000436324 TRANK1O15050 2925 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 ARID2Q68CP9 1835 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 HOXA11P31270 313 aaPredicted RBP20.33■□□□□ 0.85
HMGN1-207ENST00000436324 RAB27AP51159 221 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 HAUS3Q68CZ6 603 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 KCNT2Q6UVM3 1135 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 ADGRD2Q7Z7M1 963 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 SNX29Q8TEQ0 813 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 CPB2Q96IY4 423 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 ZNF558Q96NG5 402 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 TRAIPQ9BWF2 469 aa20.33■□□□□ 0.85
HMGN1-207ENST00000436324 MYO7AQ13402 2215 aa20.33■□□□□ 0.84
HMGN1-207ENST00000436324 LRRIQ4A6NIV6 560 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 PP2D1A8MPX8 630 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 TSPAN1O60635 241 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 CDC25AP30304 524 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 PDIA5Q14554 519 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 IL17AQ16552 155 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 LEXMQ3ZCV2 418 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 UBXN11Q5T124 520 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 PADI6Q6TGC4 694 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 RBM23Q86U06 439 aaKnown RBP20.32■□□□□ 0.84
HMGN1-207ENST00000436324 PABPC5Q96DU9 382 aaKnown RBP20.32■□□□□ 0.84
HMGN1-207ENST00000436324 POLD4Q9HCU8 107 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 KIAA1024Q9UPX6 916 aa20.32■□□□□ 0.84
HMGN1-207ENST00000436324 TCF20Q9UGU0 1960 aaKnown RBP20.32■□□□□ 0.84
HMGN1-207ENST00000436324 NT5C1B-RDH14C9J2C7 533 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 TNFRSF10AO00220 468 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 LINC01565O15544 149 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 ZNF623O75123 536 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 MBTD1Q05BQ5 628 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 CSPP1Q1MSJ5 1256 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 GLB1LQ6UWU2 654 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 DTHD1Q6ZMT9 781 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 IGSF22Q8N9C0 903 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 MCPH1Q8NEM0 835 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.31■□□□□ 0.84
HMGN1-207ENST00000436324 PGBD4Q96DM1 585 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 MRPL9Q9BYD2 267 aaKnown RBP20.31■□□□□ 0.84
HMGN1-207ENST00000436324 RAB34Q9BZG1 259 aa20.31■□□□□ 0.84
HMGN1-207ENST00000436324 DDX19AQ9NUU7 478 aaKnown RBP20.31■□□□□ 0.84
HMGN1-207ENST00000436324 LAD1O00515 517 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 OFD1O75665 1012 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 CYP11B2P19099 503 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 NRIP1P48552 1158 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 ERVFC1P60507 584 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 UBE3AQ05086 875 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 POU5F1BQ06416 359 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 NCBP1Q09161 790 aaKnown RBP20.3■□□□□ 0.84
HMGN1-207ENST00000436324 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
HMGN1-207ENST00000436324 CLUL1Q15846 466 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 NOMO2Q5JPE7 1267 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 AGMOQ6ZNB7 445 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 IFNLR1Q8IU57 520 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-207ENST00000436324 PPP2R3CQ969Q6 453 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 EIF2AQ9BY44 585 aaKnown RBP20.3■□□□□ 0.84
HMGN1-207ENST00000436324 GBP3Q9H0R5 595 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 BHMT2Q9H2M3 363 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 TLR9Q9NR96 1032 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 SPG21Q9NZD8 308 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 A0A0C4DFX4 3053 aa20.3■□□□□ 0.84
HMGN1-207ENST00000436324 B4GALT5O43286 388 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 NCK2O43639 380 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 ZC3H11AO75152 810 aaKnown RBP eCLIP20.29■□□□□ 0.84
HMGN1-207ENST00000436324 MUTP22033 750 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 PRPHP41219 470 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 BCAR1P56945 870 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 RNASELQ05823 741 aaKnown RBP20.29■□□□□ 0.84
HMGN1-207ENST00000436324 DLX2Q07687 328 aaPredicted RBP20.29■□□□□ 0.84
HMGN1-207ENST00000436324 CUL4AQ13619 759 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 PLPP4Q5VZY2 271 aa20.29■□□□□ 0.84
HMGN1-207ENST00000436324 KRT79Q5XKE5 535 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms