RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 MEIS3Q99687 375 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 SUDS3Q9H7L9 328 aaPredicted RBP6.73□□□□□ -1.33
VRK2-206ENST00000435505 VIPAS39Q9H9C1 493 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 MRPL44Q9H9J2 332 aaKnown RBP6.73□□□□□ -1.33
VRK2-206ENST00000435505 TOPORSQ9NS56 1045 aaPredicted RBP6.73□□□□□ -1.33
VRK2-206ENST00000435505 GRHPRQ9UBQ7 328 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 GIMAP2Q9UG22 337 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 PCDHGB2Q9Y5G2 931 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 TDRD9Q8NDG6 1382 aaKnown RBP6.73□□□□□ -1.33
VRK2-206ENST00000435505 NPHP4O75161 1426 aaPredicted RBP6.73□□□□□ -1.33
VRK2-206ENST00000435505 ABCC3O15438 1527 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 ABCC6O95255 1503 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 EFCAB6Q5THR3 1501 aa6.73□□□□□ -1.33
VRK2-206ENST00000435505 TMEM232C9JQI7 657 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 ARHGAP6O43182 974 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 AHCYL1O43865 530 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 ARNTP27540 789 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 ARHGAP25P42331 645 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 TNFAIP2Q03169 654 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 SFSWAPQ12872 951 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 BROXQ5VW32 411 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 LRFN4Q6PJG9 635 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 ADGRD1Q6QNK2 874 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 KCNT2Q6UVM3 1135 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 NOA1Q8NC60 698 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 ASB12Q8WXK4 309 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 TRIM63Q969Q1 353 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 SH3KBP1Q96B97 665 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 YIPF3Q9GZM5 350 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 LSG1Q9H089 658 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 CERS4Q9HA82 394 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 SH2B1Q9NRF2 756 aaPredicted RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 CORO2BQ9UQ03 480 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 QRICH2Q9H0J4 1663 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 GOLGA6L9A6NEM1 432 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 RBAK-RBAKDNI3L0D1 243 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 NDUFAB1O14561 156 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 EFCAB14O75071 495 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 TBX18O95935 607 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 RARAP10276 462 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 EIF2S2P20042 333 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 CDC25CP30307 473 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 ATICP31939 592 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 RANBP1P43487 201 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 GPR3P46089 330 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 NR5A1Q13285 461 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 PPP2R5CQ13362 524 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 PLCB4Q15147 1175 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 KIF4BQ2VIQ3 1234 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 HHATQ5VTY9 493 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 CYB5D1Q6P9G0 228 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 FASTKD5Q7L8L6 764 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 SPATA21Q7Z572 469 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 KIAA1328Q86T90 577 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 GSPT2Q8IYD1 628 aaKnown RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 B4GALNT2Q8NHY0 566 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 EZH1Q92800 747 aaPredicted RBP6.72□□□□□ -1.33
VRK2-206ENST00000435505 HPS3Q969F9 1004 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 B3GNT5Q9BYG0 378 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 FTOQ9C0B1 505 aaKnown RBP eCLIP6.72□□□□□ -1.33
VRK2-206ENST00000435505 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 DMRT3Q9NQL9 472 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 HOMER3Q9NSC5 361 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
VRK2-206ENST00000435505 A0A0U1RQJ8 604 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 AGPSO00116 658 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 PLOD3O60568 738 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 SMNDC1O75940 238 aaKnown RBP eCLIP6.71□□□□□ -1.33
VRK2-206ENST00000435505 RTN3O95197 1032 aaPredicted RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 CNOT4O95628 575 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 CFBP00751 764 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 NEFHP12036 1026 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 CKMT1AP12532 417 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 MAGEA8P43361 318 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 CDR1P51861 262 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 CEBPZQ03701 1054 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 RESTQ13127 1097 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 PDCLQ13371 301 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 STIM1Q13586 685 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 LAMB3Q13751 1172 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 DDB1Q16531 1140 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 ADCK5Q3MIX3 580 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 FILIP1LQ4L180 1135 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 RPS26P11Q5JNZ5 115 aaPredicted RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 CAPRIN2Q6IMN6 1127 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 MIS18BP1Q6P0N0 1132 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 BZW1Q7L1Q6 419 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 ESX1Q8N693 406 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 TBC1D5Q92609 795 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 TMEM169Q96HH4 297 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 RSRC1Q96IZ7 334 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 JAKMIP1Q96N16 626 aaKnown RBP6.71□□□□□ -1.33
VRK2-206ENST00000435505 BLOC1S6Q9UL45 172 aa6.71□□□□□ -1.33
VRK2-206ENST00000435505 SPDYE3A6NKU9 549 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms